| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633302
Identifier: 221633302
GI number: 221633302
Start: 1313680
End: 1314171
Strand: Reverse
Name: 221633302
Synonym: trd_1321
Alternate gene names: NA
Gene position: 1314171-1313680 (Counterclockwise)
Preceding gene: 221633303
Following gene: 221633300
Centisome position: 65.61
GC content: 61.18
Gene sequence:
>492_bases GTGATGACGGGGACGGGGCGAGTCGTAGCTGTCTGCTCGAGTCCGAACGGTGGGGTGCCCAAGTACCGGCGAGTCGAGAT CGAAATCGGACCGTATGGTGTCGTCGGTGATTACCATGCTGGGCCGGTGAATCGCCACAAGAAGCGTGGCGATCCCGAAC CGAATACACGCCAGATCACGATCGTCGCACAGGAAGTGTTGGACGACGTCAATGAGCAGCTCGGCATCCAGCTCGAACCG GGACATCTCGGAGAGAACCTCACGGTCGTCGGATTAGGTGATCTCAGTGACCTCGTGCCAGGCGATGTTCTCCGCGTCGG CACGGCGGTGCTGGAGATCACGGCACAAAACAAGCCATGCAGTACGGTGGCCGTCTATCACGAACAACTCGTCAAGGAGC TGTACGGACGGCGTGGCGTCTGTGCGATCGTGCGACAGCCGGGACGGGTACGTCCAGGTGACCTGGTCGTCCTCGAGCGC GGAACTCGCTAG
Upstream 100 bases:
>100_bases TCGTTCCGCGGCCGGATGTCACCGTCCGTTATCGGCGGATCCGGGCGGAACTGAGAGCGTTGGCGGAAGGATTGGAACGA GCGGTGGAAGCGGAGGGGTC
Downstream 100 bases:
>100_bases CTATTGGCGACGCGGGACGCTTCCGGGAATGGAGCGAGATTGCGGGCCGCTTGGAGCGCTCGCACCTTCCTCCGCTGCGC ACGATCGAGCTTCATGAGCA
Product: putative MOSC domain
Products: NA
Alternate protein names: MOSC Domain Containing Protein; MOCO Sulfurase Domain-Containing Protein; MOSC Domain; Mosc Domain Protein
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MMTGTGRVVAVCSSPNGGVPKYRRVEIEIGPYGVVGDYHAGPVNRHKKRGDPEPNTRQITIVAQEVLDDVNEQLGIQLEP GHLGENLTVVGLGDLSDLVPGDVLRVGTAVLEITAQNKPCSTVAVYHEQLVKELYGRRGVCAIVRQPGRVRPGDLVVLER GTR
Sequences:
>Translated_163_residues MMTGTGRVVAVCSSPNGGVPKYRRVEIEIGPYGVVGDYHAGPVNRHKKRGDPEPNTRQITIVAQEVLDDVNEQLGIQLEP GHLGENLTVVGLGDLSDLVPGDVLRVGTAVLEITAQNKPCSTVAVYHEQLVKELYGRRGVCAIVRQPGRVRPGDLVVLER GTR >Mature_163_residues MMTGTGRVVAVCSSPNGGVPKYRRVEIEIGPYGVVGDYHAGPVNRHKKRGDPEPNTRQITIVAQEVLDDVNEQLGIQLEP GHLGENLTVVGLGDLSDLVPGDVLRVGTAVLEITAQNKPCSTVAVYHEQLVKELYGRRGVCAIVRQPGRVRPGDLVVLER GTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17581; Mature: 17581
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTGTGRVVAVCSSPNGGVPKYRRVEIEIGPYGVVGDYHAGPVNRHKKRGDPEPNTRQIT CCCCCCCEEEEEECCCCCCCCEEEEEEEECCEEEECCCCCCCCCCHHCCCCCCCCCEEEE IVAQEVLDDVNEQLGIQLEPGHLGENLTVVGLGDLSDLVPGDVLRVGTAVLEITAQNKPC EEHHHHHHHHHHHHCCEECCCCCCCCEEEEEECCCCHHCCCHHHHHCEEEEEEEECCCCC STVAVYHEQLVKELYGRRGVCAIVRQPGRVRPGDLVVLERGTR CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCC >Mature Secondary Structure MMTGTGRVVAVCSSPNGGVPKYRRVEIEIGPYGVVGDYHAGPVNRHKKRGDPEPNTRQIT CCCCCCCEEEEEECCCCCCCCEEEEEEEECCEEEECCCCCCCCCCHHCCCCCCCCCEEEE IVAQEVLDDVNEQLGIQLEPGHLGENLTVVGLGDLSDLVPGDVLRVGTAVLEITAQNKPC EEHHHHHHHHHHHHCCEECCCCCCCCEEEEEECCCCHHCCCHHHHHCEEEEEEEECCCCC STVAVYHEQLVKELYGRRGVCAIVRQPGRVRPGDLVVLERGTR CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA