| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is gntK [H]
Identifier: 221633303
GI number: 221633303
Start: 1314168
End: 1315652
Strand: Reverse
Name: gntK [H]
Synonym: trd_1323
Alternate gene names: 221633303
Gene position: 1315652-1314168 (Counterclockwise)
Preceding gene: 221633304
Following gene: 221633302
Centisome position: 65.68
GC content: 64.04
Gene sequence:
>1485_bases ATGGTGGGGCAGCAGGAATTCGTCCTCGCTCTCGATATCGGGAGTTCATCCGTTCGTGCCGGCCTTTTCGACCGGACTGG TCGACTGGTCGAAGGAACAGGGCAGCGCGTACCGTATCGTTTGGAGACGGGGCCTGATGGGCGTGCTGAACTCGATCCGC AGCTGCTGTGCGAACGGATCGAGTTGCTGCTCGATCGCGTGCATGCGACTGCGCCTGCACCGGTGTGCGCGGTCGGCATC AGCTGTTTCTGGCATAGCCTGGTCGGGCTGAATGGACAGGGAGAGCCGACGACACCGGTGACCATGTGGGCCGATACGCG TGCCCGTGAGGTGGCTGCGCGTTTGCGCTCCGCTTTTGACGCGATGGCGCATCATCAACGCACTGGAGGTTACCTCCATC CCAGTTATCCAGTCGCTCGGCTCGCCTGGTACCGGAGTCTCGGCTCACCCGAATGGCGATCGTCGACGTACTGGTGCTCC TTCCCTGATTATCTTTTCCGACGGTGGACCGGTGCCCTCGTTACCTCGATCTCGATGGCTTCCGGAACAGGGCTGTTCGA TACGTGGCGGCTCGCCTGGGACGCCGAAACCTGCCGGGTAATCGGGATCGAAACAGAGCAGCTGCCGGTGGTGACCGATG TGGGTCAGCAGCTCAGAGGACGGTACACGAAGCGTTGGCCGAAGTTGGCATCGGCCGTGTGGTACCCGGCGTGGGGCGAC GGAGCGTGCAGTAACGTCGGGAGCGGTGCGGTCGGCGGCGACCGGGTCACTGTGATGATCGGAACCTCGGCCGCGGTGCG AGTACTGTGGAAGGGGGTGCCGGTCAGCGTTCCCCGGGGACTCTGGCTCTATCGCTTGGATGGCGACCATGTGCTAGCCG GAGGTGCCTTGAGTGAAGGCGGCAATCTCATCGACTGGATCCGGCAGCGTTTCGCGTTGCCCCCTGAAGAGGAGCTTTGG GAGCGCGTCAGCAAGGTCGCTGATGGCGCGGAAGGGGTGCGCTGGTTGCCGACCATCGCTGGAGAGCGGAGCCTGCGCTG GCCGGTGGATGCCGTAGCGACGTTGACTGGTCTCCGGCTGGGGCATGATGGCGTCGTGATCCTGCGTGCGGCGCTGGAGG CGGTCGCCTGTCGCCTGGCTGATGTCTTGGATGCACTGATGGCGATCCGGCCAGAAATCGGCACGGTCATTGCGAGTGGG AACGCTTTGCAGGGAACACCAGGCTGGTTGCAGATCGTTGCCGATGCGCTCGGGAAGACGTTGCTGGTCGCACCGGATCC CGAAGCCTCGCTCCGCGGTGCCGCTTTGGTCACTCTCGCTCGTGTGGGAGATCAGCCATTGGAGAACCTGGCACGTGCTG AGATCGCCGAGTGGGCGCGAGTCGTTCCGCGGCCGGATGTCACCGTCCGTTATCGGCGGATCCGGGCGGAACTGAGAGCG TTGGCGGAAGGATTGGAACGAGCGGTGGAAGCGGAGGGGTCGTGA
Upstream 100 bases:
>100_bases CGCGATCGGGGAAGACGATACGCGAGCTGCTCGATCGACTCGAGGACTGGTCGAGCGGGATCCGCCGGATCGCTGGTCTG GAGTGGCTCACTGAGGGTTG
Downstream 100 bases:
>100_bases TGACGGGGACGGGGCGAGTCGTAGCTGTCTGCTCGAGTCCGAACGGTGGGGTGCCCAAGTACCGGCGAGTCGAGATCGAA ATCGGACCGTATGGTGTCGT
Product: putative gluconokinase
Products: NA
Alternate protein names: Gluconate kinase [H]
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MVGQQEFVLALDIGSSSVRAGLFDRTGRLVEGTGQRVPYRLETGPDGRAELDPQLLCERIELLLDRVHATAPAPVCAVGI SCFWHSLVGLNGQGEPTTPVTMWADTRAREVAARLRSAFDAMAHHQRTGGYLHPSYPVARLAWYRSLGSPEWRSSTYWCS FPDYLFRRWTGALVTSISMASGTGLFDTWRLAWDAETCRVIGIETEQLPVVTDVGQQLRGRYTKRWPKLASAVWYPAWGD GACSNVGSGAVGGDRVTVMIGTSAAVRVLWKGVPVSVPRGLWLYRLDGDHVLAGGALSEGGNLIDWIRQRFALPPEEELW ERVSKVADGAEGVRWLPTIAGERSLRWPVDAVATLTGLRLGHDGVVILRAALEAVACRLADVLDALMAIRPEIGTVIASG NALQGTPGWLQIVADALGKTLLVAPDPEASLRGAALVTLARVGDQPLENLARAEIAEWARVVPRPDVTVRYRRIRAELRA LAEGLERAVEAEGS
Sequences:
>Translated_494_residues MVGQQEFVLALDIGSSSVRAGLFDRTGRLVEGTGQRVPYRLETGPDGRAELDPQLLCERIELLLDRVHATAPAPVCAVGI SCFWHSLVGLNGQGEPTTPVTMWADTRAREVAARLRSAFDAMAHHQRTGGYLHPSYPVARLAWYRSLGSPEWRSSTYWCS FPDYLFRRWTGALVTSISMASGTGLFDTWRLAWDAETCRVIGIETEQLPVVTDVGQQLRGRYTKRWPKLASAVWYPAWGD GACSNVGSGAVGGDRVTVMIGTSAAVRVLWKGVPVSVPRGLWLYRLDGDHVLAGGALSEGGNLIDWIRQRFALPPEEELW ERVSKVADGAEGVRWLPTIAGERSLRWPVDAVATLTGLRLGHDGVVILRAALEAVACRLADVLDALMAIRPEIGTVIASG NALQGTPGWLQIVADALGKTLLVAPDPEASLRGAALVTLARVGDQPLENLARAEIAEWARVVPRPDVTVRYRRIRAELRA LAEGLERAVEAEGS >Mature_494_residues MVGQQEFVLALDIGSSSVRAGLFDRTGRLVEGTGQRVPYRLETGPDGRAELDPQLLCERIELLLDRVHATAPAPVCAVGI SCFWHSLVGLNGQGEPTTPVTMWADTRAREVAARLRSAFDAMAHHQRTGGYLHPSYPVARLAWYRSLGSPEWRSSTYWCS FPDYLFRRWTGALVTSISMASGTGLFDTWRLAWDAETCRVIGIETEQLPVVTDVGQQLRGRYTKRWPKLASAVWYPAWGD GACSNVGSGAVGGDRVTVMIGTSAAVRVLWKGVPVSVPRGLWLYRLDGDHVLAGGALSEGGNLIDWIRQRFALPPEEELW ERVSKVADGAEGVRWLPTIAGERSLRWPVDAVATLTGLRLGHDGVVILRAALEAVACRLADVLDALMAIRPEIGTVIASG NALQGTPGWLQIVADALGKTLLVAPDPEASLRGAALVTLARVGDQPLENLARAEIAEWARVVPRPDVTVRYRRIRAELRA LAEGLERAVEAEGS
Specific function: Unknown
COG id: COG1070
COG function: function code G; Sugar (pentulose and hexulose) kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGGY kinase family [H]
Homologues:
Organism=Escherichia coli, GI1789987, Length=511, Percent_Identity=23.4833659491194, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000577 - InterPro: IPR018485 - InterPro: IPR018483 - InterPro: IPR018484 - InterPro: IPR006002 [H]
Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 53714; Mature: 53714
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGQQEFVLALDIGSSSVRAGLFDRTGRLVEGTGQRVPYRLETGPDGRAELDPQLLCERI CCCCCEEEEEEECCCCHHHCCHHHHCCCEEECCCCCCCEEECCCCCCCCCCCHHHHHHHH ELLLDRVHATAPAPVCAVGISCFWHSLVGLNGQGEPTTPVTMWADTRAREVAARLRSAFD HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHH AMAHHQRTGGYLHPSYPVARLAWYRSLGSPEWRSSTYWCSFPDYLFRRWTGALVTSISMA HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHC SGTGLFDTWRLAWDAETCRVIGIETEQLPVVTDVGQQLRGRYTKRWPKLASAVWYPAWGD CCCCCCHHHEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC GACSNVGSGAVGGDRVTVMIGTSAAVRVLWKGVPVSVPRGLWLYRLDGDHVLAGGALSEG CCCCCCCCCCCCCCEEEEEEECHHHHHHHHCCCCCCCCCCEEEEEECCCEEEECCCCCCC GNLIDWIRQRFALPPEEELWERVSKVADGAEGVRWLPTIAGERSLRWPVDAVATLTGLRL CCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEECHHHCCCCCCCCCHHHHHHHHHCEE GHDGVVILRAALEAVACRLADVLDALMAIRPEIGTVIASGNALQGTPGWLQIVADALGKT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHCCE LLVAPDPEASLRGAALVTLARVGDQPLENLARAEIAEWARVVPRPDVTVRYRRIRAELRA EEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LAEGLERAVEAEGS HHHHHHHHHHCCCC >Mature Secondary Structure MVGQQEFVLALDIGSSSVRAGLFDRTGRLVEGTGQRVPYRLETGPDGRAELDPQLLCERI CCCCCEEEEEEECCCCHHHCCHHHHCCCEEECCCCCCCEEECCCCCCCCCCCHHHHHHHH ELLLDRVHATAPAPVCAVGISCFWHSLVGLNGQGEPTTPVTMWADTRAREVAARLRSAFD HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHH AMAHHQRTGGYLHPSYPVARLAWYRSLGSPEWRSSTYWCSFPDYLFRRWTGALVTSISMA HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHC SGTGLFDTWRLAWDAETCRVIGIETEQLPVVTDVGQQLRGRYTKRWPKLASAVWYPAWGD CCCCCCHHHEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC GACSNVGSGAVGGDRVTVMIGTSAAVRVLWKGVPVSVPRGLWLYRLDGDHVLAGGALSEG CCCCCCCCCCCCCCEEEEEEECHHHHHHHHCCCCCCCCCCEEEEEECCCEEEECCCCCCC GNLIDWIRQRFALPPEEELWERVSKVADGAEGVRWLPTIAGERSLRWPVDAVATLTGLRL CCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEECHHHCCCCCCCCCHHHHHHHHHCEE GHDGVVILRAALEAVACRLADVLDALMAIRPEIGTVIASGNALQGTPGWLQIVADALGKT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHCCE LLVAPDPEASLRGAALVTLARVGDQPLENLARAEIAEWARVVPRPDVTVRYRRIRAELRA EEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LAEGLERAVEAEGS HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3020045; 7584049; 9384377 [H]