The gene/protein map for NC_011959 is currently unavailable.
Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633300

Identifier: 221633300

GI number: 221633300

Start: 1311957

End: 1312844

Strand: Reverse

Name: 221633300

Synonym: trd_1320

Alternate gene names: NA

Gene position: 1312844-1311957 (Counterclockwise)

Preceding gene: 221633302

Following gene: 221633299

Centisome position: 65.54

GC content: 58.9

Gene sequence:

>888_bases
GTGAACCCGGTCGTCGATCGGGAAATTGCTGCAGTCAGCGCGAATTCTTCCGATCCTCGTGATGCCGGATCGGCTCGAGT
GAGTGAAGAGGACGATAGACATATTCTGGAGGTCTCATCGGTGGAATCGACGACGGTTTCGACGCAGCCTCTCGACGATA
TTCGCGACGAGGTGCGGCGCGTGCTCGAGGCAGCTGAGGCGCGTGGCGTGACCCTTCGGGTTCTCGGTGGTGTCGCCGTC
TTTTTGCACTCGCCGAGTGCGTCTCACCGTGCGCTGCAACGTGTCTATCGTGATGCTGATTTCGTTGGGTTGTCGGCGCA
GAAGCGTGCGATCGAGGCGCTCTTCGCTGATCTCGGGTATCAAGCGGATCGCGAATTCAATACACTGCATGGTCACCAGC
GGCTCTTCTTCTGGGATCCGCTGCACGAGCGGCAGATCGATGTCTTCCTCGATCAGTTGCGCATGTGCCACACCCTGGAC
TTTCGTGGCCGGCTGGAGCGGGATCGCTGGACGCTTCCGCTTGCCGACTTGCTTTTGACCAAGCTGCAGATCTGGGAGGC
GAACGAAAAGGATCTGATCGATATCGTCGCTCTGCTTCATGATCATCCGCTTGGGTACGGCGATGAGGAGACGATCGATA
TTCGCCGTATCGTGGATGTCTTGAGCACGGACTGGGGTTGGTATCGCACGGCAAAGGAGAACGTCGATCGGGTTCGGACG
CTGATCCTCGAGCGAGAACTCGCTGACGAGTTCGTCTCCTTGCGGCGGCTCGAAGAATTATGGCGTGCCGTCGAAGAGGC
ACCGAAGAGTCGTGCCTGGAAACTGCGCGCGATGATCGGTGAACGAAAGCGCTGGTACGAGTTGCCGGAGGAAGTCCGGC
GCGACTGA

Upstream 100 bases:

>100_bases
CGTTTCGGCTCGTTGCGCTGGTGAGTCGGATGGTGAATCGGGTATGGGCAGTTCCTCGTTTGTATGGTGCGGGAATGTAT
CCTATACTTGGCTGAGTCAG

Downstream 100 bases:

>100_bases
GCACCGGTCTGGGCAGGACGGGAGTGACATGGTCTGGTTCCGGAAAGGAAAAGGCCAAGCGACGCGTCGCTTGGCGCTCT
ACTATACGAGTGACATACAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MNPVVDREIAAVSANSSDPRDAGSARVSEEDDRHILEVSSVESTTVSTQPLDDIRDEVRRVLEAAEARGVTLRVLGGVAV
FLHSPSASHRALQRVYRDADFVGLSAQKRAIEALFADLGYQADREFNTLHGHQRLFFWDPLHERQIDVFLDQLRMCHTLD
FRGRLERDRWTLPLADLLLTKLQIWEANEKDLIDIVALLHDHPLGYGDEETIDIRRIVDVLSTDWGWYRTAKENVDRVRT
LILERELADEFVSLRRLEELWRAVEEAPKSRAWKLRAMIGERKRWYELPEEVRRD

Sequences:

>Translated_295_residues
MNPVVDREIAAVSANSSDPRDAGSARVSEEDDRHILEVSSVESTTVSTQPLDDIRDEVRRVLEAAEARGVTLRVLGGVAV
FLHSPSASHRALQRVYRDADFVGLSAQKRAIEALFADLGYQADREFNTLHGHQRLFFWDPLHERQIDVFLDQLRMCHTLD
FRGRLERDRWTLPLADLLLTKLQIWEANEKDLIDIVALLHDHPLGYGDEETIDIRRIVDVLSTDWGWYRTAKENVDRVRT
LILERELADEFVSLRRLEELWRAVEEAPKSRAWKLRAMIGERKRWYELPEEVRRD
>Mature_295_residues
MNPVVDREIAAVSANSSDPRDAGSARVSEEDDRHILEVSSVESTTVSTQPLDDIRDEVRRVLEAAEARGVTLRVLGGVAV
FLHSPSASHRALQRVYRDADFVGLSAQKRAIEALFADLGYQADREFNTLHGHQRLFFWDPLHERQIDVFLDQLRMCHTLD
FRGRLERDRWTLPLADLLLTKLQIWEANEKDLIDIVALLHDHPLGYGDEETIDIRRIVDVLSTDWGWYRTAKENVDRVRT
LILERELADEFVSLRRLEELWRAVEEAPKSRAWKLRAMIGERKRWYELPEEVRRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34270; Mature: 34270

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPVVDREIAAVSANSSDPRDAGSARVSEEDDRHILEVSSVESTTVSTQPLDDIRDEVRR
CCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHH
VLEAAEARGVTLRVLGGVAVFLHSPSASHRALQRVYRDADFVGLSAQKRAIEALFADLGY
HHHHHHHCCCEEEEECCEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
QADREFNTLHGHQRLFFWDPLHERQIDVFLDQLRMCHTLDFRGRLERDRWTLPLADLLLT
CCCCCHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
KLQIWEANEKDLIDIVALLHDHPLGYGDEETIDIRRIVDVLSTDWGWYRTAKENVDRVRT
HHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LILERELADEFVSLRRLEELWRAVEEAPKSRAWKLRAMIGERKRWYELPEEVRRD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHCC
>Mature Secondary Structure
MNPVVDREIAAVSANSSDPRDAGSARVSEEDDRHILEVSSVESTTVSTQPLDDIRDEVRR
CCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHH
VLEAAEARGVTLRVLGGVAVFLHSPSASHRALQRVYRDADFVGLSAQKRAIEALFADLGY
HHHHHHHCCCEEEEECCEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
QADREFNTLHGHQRLFFWDPLHERQIDVFLDQLRMCHTLDFRGRLERDRWTLPLADLLLT
CCCCCHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
KLQIWEANEKDLIDIVALLHDHPLGYGDEETIDIRRIVDVLSTDWGWYRTAKENVDRVRT
HHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LILERELADEFVSLRRLEELWRAVEEAPKSRAWKLRAMIGERKRWYELPEEVRRD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA