| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is leuS [H]
Identifier: 221633223
GI number: 221633223
Start: 1224492
End: 1226981
Strand: Reverse
Name: leuS [H]
Synonym: trd_1240
Alternate gene names: 221633223
Gene position: 1226981-1224492 (Counterclockwise)
Preceding gene: 221633224
Following gene: 221633221
Centisome position: 61.26
GC content: 61.69
Gene sequence:
>2490_bases ATGGCGACGACGCAGGAGGTCCGGCAGGCCGAGCGGTACGAGCCGCAAGTGATCGAGCCCAAATGGCAGCAAATCTGGGA GGAGACGGGTATCTACTCCAACGTGCAGGAGGATCCCACTCGTCCCAAATGGTATCACCTGGTCATGTTCCCCTATCCAT CAGGAAATTTGCACATCGGTCATTGGTTCTCCTACGCACCAGCTGATGCTGCTGCCCGCTACAAGCGGATGCGTGGTTAC AATGTCCTCTTCCCATTTGGGTTCGACGCCTTCGGGTTGCCGGCAGAGAACGCGGCGATCAAACACGGTATTCATCCCCG CGTGTGGACCATGCAGAACATCGCGCACATGAAAAAGCAGCTGCGCTCTCTCGGCGGGATGTTCGATTGGTCCAAGGAAG TGATCACGTGCCTTCCCGAGTATTACCGCTGGAACCAGTGGTTCTTCCTCCAGTTCTACAAGCGGGGTCTGGCCTACCGT GCCAAGGCGCCAGTCTGGTGGTGCCCGACATGCCAGACGGTGCTGGCCAATGAGCAAGTCATCGATGGACGCTGCGAGCG CTGCAGCACCGAGGTGTACCGACGAGACCTCGAACAGTGGTTCTTGCGCATCACCGCGTATGCTGAAGAACTTCTGCGCT TCGATGGGATCGACTGGCCGGAGCGCGTCATCACGATGCAGCGCAACTGGATCGGCCGATCGGAGGGCGCGCGGATCGTC TTTCGCTCCGAGCAGGGAGACCCGATCGAAGTGTTCACGACACGCCCGGATACCCTCTGGGGGGCAACCTTCCTGGTGTT GGCGCCGGAACATCCACTCGTGCAGAAGCTGACGACCCCTGAGCGGCGAGCCGAAGTCGAGGCGTACATCGATCAGGCGC GGCGGCGGAGCGACATCGAGCGAACCTCGACTGAACGTGAAAAGACGGGTGTCTTCATCGGCGCGTACGCGATCAATCCG GCGAACGGGCAGCGGATCCCCATCTGGATCGCCGATTACGTGCTCATGCAGTACGGTACCGGCGCCATCATGGCGGTGCC GGCGCACGATCAGCGCGACTTCGAGTTCGCACGCGCCTTTGGCCTACCGATCGTGGTCGTGATCCAGCCACGAGACCGGA CACTGGATCCGGCGACCATGGAAGAGGCATACGACGGCGAGGGCGTGATGGTCAATTCTGGTCCCTTCGACGGTACGCCG ACGGAGGGAGGCGAAGCGATCCGCCGCGTCATCGCGTGGCTGGAGGAGCGAGGGGTGGGCCGAGGTGAAGTGACGTACCG GTTGCGTGATTGGCTCATCTCGCGCCAGCGTTATTGGGGAACGCCCATCCCGATCGTCTATTGTGATCACTGCGGCATCG TTCCGGTCCCAGAGGACCAGCTTCCCGTGCTGTTGCCGGAGGATGCGGAGTTCATGCCGACCGGGCAATCGCCCTTGATC ACCCACGAGGCCTTCGTGAACACCACCTGTCCACAGTGCGGTGCTCCGGCACGGCGCGAAACCGATACGATGGATACCTT CGTAGACTCGTCTTGGTACTGGTACCGCTATCTGAGTCCGCACGAGAACGAGCGGCCGTTCGATCCTGAAAAGGTCGCCT ATTGGACGCCGGTCGATCAGTATACCGGTGGCATCGAGCACGCTATCCTGCATCTCCTCTACAGCCGCTTCTGGACGAAG GCGCTCGCTGACCTCGGATTGGTGAATCATCGCGAGCCGTTTCTCCGGCTCTTCAATCACGGCGTCATTTTGGGCGAAGA TGGCGAGAAGATGTCCAAGAGCCGCGGCAATGTCGTCGATCCCGACGACCTCGTGGCCCGGTTGGGAGCAGACACGGTTC GACTGTACCTGATGTTCATCGGTCCTTGGTCGCAGGGCGGCCCGTGGAGTTCTCGCGGGGTCGCGGGTGTGCAGCGCTTC TTGCAGCGTGTTTGGGCGCTCGTGACCGAAACGCTCGATGTGCCGGTCGACACAGCGGAGGACGAGCAGGCCCGAGCTTT GCGCCGGCTCGTGCACCGGACGATCAAGCACGTGACCGACGACTTCGAAACGTTCAGCTTCAATACCGCAATCGCGCGGA TGATGGAACTCGTGAACGAGTTGTCACGCTTGCGAGAGACCACGGTCGTGCGGATGCCGGTCTGGCGGGAGGCGTTGGAG ACGCTCGTCCTCTTGCTCGCGCCGGGAGCACCGCATTTGGCGGAAGAGCTTTGGCAGAGACTCGGCAAGCCGTACAGCGT GCACCAGCAATCCTGGCCGGCGTATGATCCAGCACTGGCGGCTGAGGAGACGGTCGAACTAGTGATTCAAGTGAATGGGC GGGTGCGCGATCGCCTGCTGGTTCCGGCTGCGATCGATGAGGACGAAGCGGTGGCGCGAGCCCGCGAACTGGAGCGCGTG CAGGCCTACTTGGCAGGGAAGCGGATCGAGCGAGTCGTCTACGTGCCCGGTCGGCTCGTGAACTTCGTTGTCAGTGACAC GGCCGACTGA
Upstream 100 bases:
>100_bases GCAGGTGTGGCGTCAAGGAGGGTGGTACCGCGGGCTGGCCCGTCCCTTCGTGGACGGGCCGCTGTCCGTTCGAGGAGACC GAGGCGCGGGAGGAGCAGCG
Downstream 100 bases:
>100_bases GTGTTCGTCAGCGGCGACCGAGCAGGAAAGCCAGCGTCGCGACCGCCTCGCGTGCGATGTACCAGCGCTCGAGCGGCGAG CCAGGCCGGATCGGACTACC
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 829; Mature: 828
Protein sequence:
>829_residues MATTQEVRQAERYEPQVIEPKWQQIWEETGIYSNVQEDPTRPKWYHLVMFPYPSGNLHIGHWFSYAPADAAARYKRMRGY NVLFPFGFDAFGLPAENAAIKHGIHPRVWTMQNIAHMKKQLRSLGGMFDWSKEVITCLPEYYRWNQWFFLQFYKRGLAYR AKAPVWWCPTCQTVLANEQVIDGRCERCSTEVYRRDLEQWFLRITAYAEELLRFDGIDWPERVITMQRNWIGRSEGARIV FRSEQGDPIEVFTTRPDTLWGATFLVLAPEHPLVQKLTTPERRAEVEAYIDQARRRSDIERTSTEREKTGVFIGAYAINP ANGQRIPIWIADYVLMQYGTGAIMAVPAHDQRDFEFARAFGLPIVVVIQPRDRTLDPATMEEAYDGEGVMVNSGPFDGTP TEGGEAIRRVIAWLEERGVGRGEVTYRLRDWLISRQRYWGTPIPIVYCDHCGIVPVPEDQLPVLLPEDAEFMPTGQSPLI THEAFVNTTCPQCGAPARRETDTMDTFVDSSWYWYRYLSPHENERPFDPEKVAYWTPVDQYTGGIEHAILHLLYSRFWTK ALADLGLVNHREPFLRLFNHGVILGEDGEKMSKSRGNVVDPDDLVARLGADTVRLYLMFIGPWSQGGPWSSRGVAGVQRF LQRVWALVTETLDVPVDTAEDEQARALRRLVHRTIKHVTDDFETFSFNTAIARMMELVNELSRLRETTVVRMPVWREALE TLVLLLAPGAPHLAEELWQRLGKPYSVHQQSWPAYDPALAAEETVELVIQVNGRVRDRLLVPAAIDEDEAVARARELERV QAYLAGKRIERVVYVPGRLVNFVVSDTAD
Sequences:
>Translated_829_residues MATTQEVRQAERYEPQVIEPKWQQIWEETGIYSNVQEDPTRPKWYHLVMFPYPSGNLHIGHWFSYAPADAAARYKRMRGY NVLFPFGFDAFGLPAENAAIKHGIHPRVWTMQNIAHMKKQLRSLGGMFDWSKEVITCLPEYYRWNQWFFLQFYKRGLAYR AKAPVWWCPTCQTVLANEQVIDGRCERCSTEVYRRDLEQWFLRITAYAEELLRFDGIDWPERVITMQRNWIGRSEGARIV FRSEQGDPIEVFTTRPDTLWGATFLVLAPEHPLVQKLTTPERRAEVEAYIDQARRRSDIERTSTEREKTGVFIGAYAINP ANGQRIPIWIADYVLMQYGTGAIMAVPAHDQRDFEFARAFGLPIVVVIQPRDRTLDPATMEEAYDGEGVMVNSGPFDGTP TEGGEAIRRVIAWLEERGVGRGEVTYRLRDWLISRQRYWGTPIPIVYCDHCGIVPVPEDQLPVLLPEDAEFMPTGQSPLI THEAFVNTTCPQCGAPARRETDTMDTFVDSSWYWYRYLSPHENERPFDPEKVAYWTPVDQYTGGIEHAILHLLYSRFWTK ALADLGLVNHREPFLRLFNHGVILGEDGEKMSKSRGNVVDPDDLVARLGADTVRLYLMFIGPWSQGGPWSSRGVAGVQRF LQRVWALVTETLDVPVDTAEDEQARALRRLVHRTIKHVTDDFETFSFNTAIARMMELVNELSRLRETTVVRMPVWREALE TLVLLLAPGAPHLAEELWQRLGKPYSVHQQSWPAYDPALAAEETVELVIQVNGRVRDRLLVPAAIDEDEAVARARELERV QAYLAGKRIERVVYVPGRLVNFVVSDTAD >Mature_828_residues ATTQEVRQAERYEPQVIEPKWQQIWEETGIYSNVQEDPTRPKWYHLVMFPYPSGNLHIGHWFSYAPADAAARYKRMRGYN VLFPFGFDAFGLPAENAAIKHGIHPRVWTMQNIAHMKKQLRSLGGMFDWSKEVITCLPEYYRWNQWFFLQFYKRGLAYRA KAPVWWCPTCQTVLANEQVIDGRCERCSTEVYRRDLEQWFLRITAYAEELLRFDGIDWPERVITMQRNWIGRSEGARIVF RSEQGDPIEVFTTRPDTLWGATFLVLAPEHPLVQKLTTPERRAEVEAYIDQARRRSDIERTSTEREKTGVFIGAYAINPA NGQRIPIWIADYVLMQYGTGAIMAVPAHDQRDFEFARAFGLPIVVVIQPRDRTLDPATMEEAYDGEGVMVNSGPFDGTPT EGGEAIRRVIAWLEERGVGRGEVTYRLRDWLISRQRYWGTPIPIVYCDHCGIVPVPEDQLPVLLPEDAEFMPTGQSPLIT HEAFVNTTCPQCGAPARRETDTMDTFVDSSWYWYRYLSPHENERPFDPEKVAYWTPVDQYTGGIEHAILHLLYSRFWTKA LADLGLVNHREPFLRLFNHGVILGEDGEKMSKSRGNVVDPDDLVARLGADTVRLYLMFIGPWSQGGPWSSRGVAGVQRFL QRVWALVTETLDVPVDTAEDEQARALRRLVHRTIKHVTDDFETFSFNTAIARMMELVNELSRLRETTVVRMPVWREALET LVLLLAPGAPHLAEELWQRLGKPYSVHQQSWPAYDPALAAEETVELVIQVNGRVRDRLLVPAAIDEDEAVARARELERVQ AYLAGKRIERVVYVPGRLVNFVVSDTAD
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=880, Percent_Identity=35.3409090909091, Blast_Score=522, Evalue=1e-148, Organism=Homo sapiens, GI5454158, Length=440, Percent_Identity=23.4090909090909, Blast_Score=99, Evalue=2e-20, Organism=Homo sapiens, GI94721239, Length=438, Percent_Identity=23.5159817351598, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI94721241, Length=438, Percent_Identity=23.5159817351598, Blast_Score=80, Evalue=6e-15, Organism=Escherichia coli, GI1786861, Length=868, Percent_Identity=45.7373271889401, Blast_Score=727, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=373, Percent_Identity=25.201072386059, Blast_Score=107, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71997510, Length=831, Percent_Identity=28.8808664259928, Blast_Score=322, Evalue=4e-88, Organism=Caenorhabditis elegans, GI71997517, Length=819, Percent_Identity=29.0598290598291, Blast_Score=322, Evalue=5e-88, Organism=Caenorhabditis elegans, GI212645227, Length=325, Percent_Identity=27.0769230769231, Blast_Score=126, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17510661, Length=439, Percent_Identity=23.4624145785877, Blast_Score=83, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17541896, Length=391, Percent_Identity=27.1099744245524, Blast_Score=79, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17554638, Length=86, Percent_Identity=39.5348837209302, Blast_Score=73, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6323414, Length=851, Percent_Identity=37.7203290246769, Blast_Score=544, Evalue=1e-155, Organism=Saccharomyces cerevisiae, GI6321531, Length=909, Percent_Identity=21.3421342134213, Blast_Score=134, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6319395, Length=407, Percent_Identity=25.0614250614251, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI21355409, Length=870, Percent_Identity=35.0574712643678, Blast_Score=433, Evalue=1e-121, Organism=Drosophila melanogaster, GI17864482, Length=387, Percent_Identity=23.5142118863049, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI24653289, Length=387, Percent_Identity=23.5142118863049, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI28574733, Length=107, Percent_Identity=37.3831775700935, Blast_Score=67, Evalue=5e-11,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 95423; Mature: 95291
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTQEVRQAERYEPQVIEPKWQQIWEETGIYSNVQEDPTRPKWYHLVMFPYPSGNLHIG CCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEE HWFSYAPADAAARYKRMRGYNVLFPFGFDAFGLPAENAAIKHGIHPRVWTMQNIAHMKKQ CEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHH LRSLGGMFDWSKEVITCLPEYYRWNQWFFLQFYKRGLAYRAKAPVWWCPTCQTVLANEQV HHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCEECCCCEEECCCHHHHHCCCHH IDGRCERCSTEVYRRDLEQWFLRITAYAEELLRFDGIDWPERVITMQRNWIGRSEGARIV HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEE FRSEQGDPIEVFTTRPDTLWGATFLVLAPEHPLVQKLTTPERRAEVEAYIDQARRRSDIE EECCCCCCEEEEECCCCCHHCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RTSTEREKTGVFIGAYAINPANGQRIPIWIADYVLMQYGTGAIMAVPAHDQRDFEFARAF HHHCHHHHCCEEEEEEEECCCCCCEEEEHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHC GLPIVVVIQPRDRTLDPATMEEAYDGEGVMVNSGPFDGTPTEGGEAIRRVIAWLEERGVG CCCEEEEECCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCC RGEVTYRLRDWLISRQRYWGTPIPIVYCDHCGIVPVPEDQLPVLLPEDAEFMPTGQSPLI CCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCE THEAFVNTTCPQCGAPARRETDTMDTFVDSSWYWYRYLSPHENERPFDPEKVAYWTPVDQ EHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEECCHHH YTGGIEHAILHLLYSRFWTKALADLGLVNHREPFLRLFNHGVILGEDGEKMSKSRGNVVD HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEECCCCHHHHHCCCCCCC PDDLVARLGADTVRLYLMFIGPWSQGGPWSSRGVAGVQRFLQRVWALVTETLDVPVDTAE HHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC DEQARALRRLVHRTIKHVTDDFETFSFNTAIARMMELVNELSRLRETTVVRMPVWREALE CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHH TLVLLLAPGAPHLAEELWQRLGKPYSVHQQSWPAYDPALAAEETVELVIQVNGRVRDRLL HHHHHHCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHEEEEEEECCCEECEEE VPAAIDEDEAVARARELERVQAYLAGKRIERVVYVPGRLVNFVVSDTAD ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHCCCCC >Mature Secondary Structure ATTQEVRQAERYEPQVIEPKWQQIWEETGIYSNVQEDPTRPKWYHLVMFPYPSGNLHIG CCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEE HWFSYAPADAAARYKRMRGYNVLFPFGFDAFGLPAENAAIKHGIHPRVWTMQNIAHMKKQ CEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHH LRSLGGMFDWSKEVITCLPEYYRWNQWFFLQFYKRGLAYRAKAPVWWCPTCQTVLANEQV HHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCEECCCCEEECCCHHHHHCCCHH IDGRCERCSTEVYRRDLEQWFLRITAYAEELLRFDGIDWPERVITMQRNWIGRSEGARIV HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEE FRSEQGDPIEVFTTRPDTLWGATFLVLAPEHPLVQKLTTPERRAEVEAYIDQARRRSDIE EECCCCCCEEEEECCCCCHHCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RTSTEREKTGVFIGAYAINPANGQRIPIWIADYVLMQYGTGAIMAVPAHDQRDFEFARAF HHHCHHHHCCEEEEEEEECCCCCCEEEEHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHC GLPIVVVIQPRDRTLDPATMEEAYDGEGVMVNSGPFDGTPTEGGEAIRRVIAWLEERGVG CCCEEEEECCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCC RGEVTYRLRDWLISRQRYWGTPIPIVYCDHCGIVPVPEDQLPVLLPEDAEFMPTGQSPLI CCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCE THEAFVNTTCPQCGAPARRETDTMDTFVDSSWYWYRYLSPHENERPFDPEKVAYWTPVDQ EHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEECCHHH YTGGIEHAILHLLYSRFWTKALADLGLVNHREPFLRLFNHGVILGEDGEKMSKSRGNVVD HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEECCCCHHHHHCCCCCCC PDDLVARLGADTVRLYLMFIGPWSQGGPWSSRGVAGVQRFLQRVWALVTETLDVPVDTAE HHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC DEQARALRRLVHRTIKHVTDDFETFSFNTAIARMMELVNELSRLRETTVVRMPVWREALE CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHH TLVLLLAPGAPHLAEELWQRLGKPYSVHQQSWPAYDPALAAEETVELVIQVNGRVRDRLL HHHHHHCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHEEEEEEECCCEECEEE VPAAIDEDEAVARARELERVQAYLAGKRIERVVYVPGRLVNFVVSDTAD ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA