| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is recX [H]
Identifier: 221633221
GI number: 221633221
Start: 1223124
End: 1223792
Strand: Reverse
Name: recX [H]
Synonym: trd_1238
Alternate gene names: 221633221
Gene position: 1223792-1223124 (Counterclockwise)
Preceding gene: 221633223
Following gene: 221633220
Centisome position: 61.1
GC content: 63.53
Gene sequence:
>669_bases ATGAGCGAGGAAACGGACGCGATAACCCGGATCGTACCGGACCGTCGCCGACCCGATCGGCTACTCATCGAGCGGAACGG TTTGCCGTGGCTGCGGCTCAGTGCCCTACGGATCAGCGAACTCGATGTGCGGACCGGTGAAGTTCTCACGCCGGAGCGAC GAGCGCGCTTGGAGCATGCGGCAGCTGTCGAGGAAGCGATAGAGGCTGCACTGCGATTGCTCGCAGCGCGTCCGCGGAGT GAGGCGGAACTTGCCCGCCGACTGCGACAGAAAGGCTTCAGGGACGCCGTCGTCCAAGAAGTGATGACCAAACTCCGAGC GCTCGGCTACGTGGACGATCGTGCCTTCGTCGCGTTCTGGGTCGCGCAGCGACGCACGAGTCGTCCGCGAGGCATCGCAG CTCTGCGTCAGGAACTGCGCGCCAAAGGAATCACCGACGAGCTGATCGAAGCGGCCGTGACACACGATGCGGAGGAAGAA TTCAGCGCGGCGCTGGCGCTGGCCCAGAAGCACCTTGGGCGTTTGCAGCAACATGACCGGGTGACTCAGGAGCGCCGCGT CATCGGCTTGCTGCAGCGCCGCGGATTTTCCTGGTCCGTTATCCGGCGCGTGGTGCGGGAAGTGTTTTCCGGAAAAGCTG GAGACGACGATTTTCCGCTGGCTGATTGA
Upstream 100 bases:
>100_bases CCAATCATGGACCGGCGCGAGACGCTCGTCGAGGTACACATCCGATACATTCTCCCGTTCCTAACTGTGCCAGATGACTC GTTGCCGAGTGGAGGACCGG
Downstream 100 bases:
>100_bases CCAGGGAGCAGATTCACGCAGAGGACCCTCACCCCCGTTCGATTGCGCATGCAGCGCTCCAGGCGAAGCCTTCGTGTGCG GGGCCGTTTCCTCCAATCTT
Product: regulatory protein recX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MSEETDAITRIVPDRRRPDRLLIERNGLPWLRLSALRISELDVRTGEVLTPERRARLEHAAAVEEAIEAALRLLAARPRS EAELARRLRQKGFRDAVVQEVMTKLRALGYVDDRAFVAFWVAQRRTSRPRGIAALRQELRAKGITDELIEAAVTHDAEEE FSAALALAQKHLGRLQQHDRVTQERRVIGLLQRRGFSWSVIRRVVREVFSGKAGDDDFPLAD
Sequences:
>Translated_222_residues MSEETDAITRIVPDRRRPDRLLIERNGLPWLRLSALRISELDVRTGEVLTPERRARLEHAAAVEEAIEAALRLLAARPRS EAELARRLRQKGFRDAVVQEVMTKLRALGYVDDRAFVAFWVAQRRTSRPRGIAALRQELRAKGITDELIEAAVTHDAEEE FSAALALAQKHLGRLQQHDRVTQERRVIGLLQRRGFSWSVIRRVVREVFSGKAGDDDFPLAD >Mature_221_residues SEETDAITRIVPDRRRPDRLLIERNGLPWLRLSALRISELDVRTGEVLTPERRARLEHAAAVEEAIEAALRLLAARPRSE AELARRLRQKGFRDAVVQEVMTKLRALGYVDDRAFVAFWVAQRRTSRPRGIAALRQELRAKGITDELIEAAVTHDAEEEF SAALALAQKHLGRLQQHDRVTQERRVIGLLQRRGFSWSVIRRVVREVFSGKAGDDDFPLAD
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 25327; Mature: 25196
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEETDAITRIVPDRRRPDRLLIERNGLPWLRLSALRISELDVRTGEVLTPERRARLEHA CCCHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH AAVEEAIEAALRLLAARPRSEAELARRLRQKGFRDAVVQEVMTKLRALGYVDDRAFVAFW HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH VAQRRTSRPRGIAALRQELRAKGITDELIEAAVTHDAEEEFSAALALAQKHLGRLQQHDR HHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VTQERRVIGLLQRRGFSWSVIRRVVREVFSGKAGDDDFPLAD HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SEETDAITRIVPDRRRPDRLLIERNGLPWLRLSALRISELDVRTGEVLTPERRARLEHA CCHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH AAVEEAIEAALRLLAARPRSEAELARRLRQKGFRDAVVQEVMTKLRALGYVDDRAFVAFW HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH VAQRRTSRPRGIAALRQELRAKGITDELIEAAVTHDAEEEFSAALALAQKHLGRLQQHDR HHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VTQERRVIGLLQRRGFSWSVIRRVVREVFSGKAGDDDFPLAD HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA