The gene/protein map for NC_011959 is currently unavailable.
Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633122

Identifier: 221633122

GI number: 221633122

Start: 1123403

End: 1124854

Strand: Reverse

Name: 221633122

Synonym: trd_1138

Alternate gene names: NA

Gene position: 1124854-1123403 (Counterclockwise)

Preceding gene: 221633130

Following gene: 221633121

Centisome position: 56.16

GC content: 62.05

Gene sequence:

>1452_bases
GTGATGAGAGGTGAACCACGTGGTCACCGGCTCGGTTCGAAACTGACGCGGCGGGGACTGCTCCGAGGGTTGGCAGTCGG
TGCCGCGGTGCCCGCAGTGAGCGCGTTGCTGGCGGCCTGTGCGGGTGGACAGGCCACGCCGACACCGGCCCCGCAACCGA
CACCGACGGCTGCTCCAGCGGCACAACCGACTCCGACTGCTGCGGCTGCGTCACCGACGCCGGCTGCGCCACCGACGCCG
ACTCCGGTCGTGCTGAAGGGGACGAAGTTGAACATTCTCTTCGGCACCTTCTTCGTTCCCGAGACCCAGGATCTCATGAA
GCAACAGCTCCAGGAGTTCGGGAAGGAAACCGGCGTCGAGGCGACGATCGACTTCATCAACTGGCCGGATCTCCAGCCCA
AGATCAGCGCGGCCGTGCAGGCAGGGGCTGGTCCGGACATCGTCGGAATGTGGGATACCTGGCCCTCGCTCTATAAGGAC
GCACTGGTCGATGTCGCCGAAATCGTCGAAAAGCGGATCAAGGGGGAGGGGGACTACTTCGACTGGGTCAAGAAGACCGT
GATGGTCGGCGATCAGTGGCTGAGCATTCCGATTGGTGCCCCGACGAGCGCACAGGTCTACCGGAAGAGCCTCCTGGAGA
AGGCCGGTTGGCCCGATCCGAACAACCCGCCGGACACCTGGGAAGATCTCTTCAAGATCGGCGTGGAGTTCAAGAAGTTG
GGTATGCCGCTCGGACAGGCTTTCGGCCACTCCACTGGTGACCCGCCGTCCTTCTGCTATGCCTTCATGTGGGCCTACGG
GGCGATGGAGGTCGAAGCGGACGGGAAGACGGTCGCGTTCAACAAGCCGCAGTTCGTCGAGGGGATGAAGCTCTTCCTGA
GCTATTGGAAGCCAGCGTTCGACGAAACCGGATTGTCCTGGGACGATGCGACCAACAACCGGGCTTTCCTGGCGGGCCAG
ATCGGCTGGACCTTCAACGGGAGCAGCATTTACATCGCGGCCAAGAAACAGGCGCCCGACATCGCGGAGGACATCATCCA
CCATATCTATCCGAAGGGACCAGCCGGCCGATTCAACAATTTGGGGAGCTGGTCGGTCGGGATCCTCAAGTACTCGAAGA
ACGTTGCCGGTGCCAAGGCGTTCCTCGAGTGGTGGACGGCGCCCGAGCAGTTCCGCAAGTGGCTGGAGATCCAGCAGGGA
TACCAGGTCGCGCCGACCCAATACTATCTCGATGACCCGTATTACAAGGCTGACCCGAAGCTGGTGCCGTATGTGGAAGC
GGCCAAGTACGGTCGCAACAAAGGCTACGCCGGGCTGGGCAACGAGAAAGCAGCCGAGGCATTCGCGCGGTATGTCGTGG
TCGATACGTTCGCCCGCGCGATCCAATCCGGCAATGCCGAGGAAGCGATCCAGTGGGGCGCCAGCGAATTGGAGAAGATT
TACAGTCGATGA

Upstream 100 bases:

>100_bases
CTTCTCCGATCGTCCGGAATATCGGACAACGGATGAAACGACGAACGACCGAGCGTACGGCAGTGTGGGTGGGTCGCTAG
TGAAGCGAGGAGGAGGTCCA

Downstream 100 bases:

>100_bases
GCGAGTCCGGGCTGGGGCAGTCGGTATACTGCCCCAGCCCGGCTGATGCACCGCAACGAGCATGACGATCGGAGTCACGC
CATGACGACTGCGCCAGCCA

Product: putative sugar uptake ABC transporter periplasmic solute-binding protein

Products: NA

Alternate protein names: Sugar ABC Transporter; Sugar ABC Transporter Periplasmic Component; Sugar ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MMRGEPRGHRLGSKLTRRGLLRGLAVGAAVPAVSALLAACAGGQATPTPAPQPTPTAAPAAQPTPTAAAASPTPAAPPTP
TPVVLKGTKLNILFGTFFVPETQDLMKQQLQEFGKETGVEATIDFINWPDLQPKISAAVQAGAGPDIVGMWDTWPSLYKD
ALVDVAEIVEKRIKGEGDYFDWVKKTVMVGDQWLSIPIGAPTSAQVYRKSLLEKAGWPDPNNPPDTWEDLFKIGVEFKKL
GMPLGQAFGHSTGDPPSFCYAFMWAYGAMEVEADGKTVAFNKPQFVEGMKLFLSYWKPAFDETGLSWDDATNNRAFLAGQ
IGWTFNGSSIYIAAKKQAPDIAEDIIHHIYPKGPAGRFNNLGSWSVGILKYSKNVAGAKAFLEWWTAPEQFRKWLEIQQG
YQVAPTQYYLDDPYYKADPKLVPYVEAAKYGRNKGYAGLGNEKAAEAFARYVVVDTFARAIQSGNAEEAIQWGASELEKI
YSR

Sequences:

>Translated_483_residues
MMRGEPRGHRLGSKLTRRGLLRGLAVGAAVPAVSALLAACAGGQATPTPAPQPTPTAAPAAQPTPTAAAASPTPAAPPTP
TPVVLKGTKLNILFGTFFVPETQDLMKQQLQEFGKETGVEATIDFINWPDLQPKISAAVQAGAGPDIVGMWDTWPSLYKD
ALVDVAEIVEKRIKGEGDYFDWVKKTVMVGDQWLSIPIGAPTSAQVYRKSLLEKAGWPDPNNPPDTWEDLFKIGVEFKKL
GMPLGQAFGHSTGDPPSFCYAFMWAYGAMEVEADGKTVAFNKPQFVEGMKLFLSYWKPAFDETGLSWDDATNNRAFLAGQ
IGWTFNGSSIYIAAKKQAPDIAEDIIHHIYPKGPAGRFNNLGSWSVGILKYSKNVAGAKAFLEWWTAPEQFRKWLEIQQG
YQVAPTQYYLDDPYYKADPKLVPYVEAAKYGRNKGYAGLGNEKAAEAFARYVVVDTFARAIQSGNAEEAIQWGASELEKI
YSR
>Mature_483_residues
MMRGEPRGHRLGSKLTRRGLLRGLAVGAAVPAVSALLAACAGGQATPTPAPQPTPTAAPAAQPTPTAAAASPTPAAPPTP
TPVVLKGTKLNILFGTFFVPETQDLMKQQLQEFGKETGVEATIDFINWPDLQPKISAAVQAGAGPDIVGMWDTWPSLYKD
ALVDVAEIVEKRIKGEGDYFDWVKKTVMVGDQWLSIPIGAPTSAQVYRKSLLEKAGWPDPNNPPDTWEDLFKIGVEFKKL
GMPLGQAFGHSTGDPPSFCYAFMWAYGAMEVEADGKTVAFNKPQFVEGMKLFLSYWKPAFDETGLSWDDATNNRAFLAGQ
IGWTFNGSSIYIAAKKQAPDIAEDIIHHIYPKGPAGRFNNLGSWSVGILKYSKNVAGAKAFLEWWTAPEQFRKWLEIQQG
YQVAPTQYYLDDPYYKADPKLVPYVEAAKYGRNKGYAGLGNEKAAEAFARYVVVDTFARAIQSGNAEEAIQWGASELEKI
YSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52723; Mature: 52723

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRGEPRGHRLGSKLTRRGLLRGLAVGAAVPAVSALLAACAGGQATPTPAPQPTPTAAPA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
AQPTPTAAAASPTPAAPPTPTPVVLKGTKLNILFGTFFVPETQDLMKQQLQEFGKETGVE
CCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCE
ATIDFINWPDLQPKISAAVQAGAGPDIVGMWDTWPSLYKDALVDVAEIVEKRIKGEGDYF
EEEEECCCCCCCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
DWVKKTVMVGDQWLSIPIGAPTSAQVYRKSLLEKAGWPDPNNPPDTWEDLFKIGVEFKKL
HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
GMPLGQAFGHSTGDPPSFCYAFMWAYGAMEVEADGKTVAFNKPQFVEGMKLFLSYWKPAF
CCCHHHHHCCCCCCCHHHHHHHHHHHCCEEEECCCCEEEECCCHHHHHHHHHHHHHCCHH
DETGLSWDDATNNRAFLAGQIGWTFNGSSIYIAAKKQAPDIAEDIIHHIYPKGPAGRFNN
CCCCCCCCCCCCCCEEEEEECCEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCC
LGSWSVGILKYSKNVAGAKAFLEWWTAPEQFRKWLEIQQGYQVAPTQYYLDDPYYKADPK
CCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCEEEECCCCCCCCCC
LVPYVEAAKYGRNKGYAGLGNEKAAEAFARYVVVDTFARAIQSGNAEEAIQWGASELEKI
CCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHH
YSR
HCC
>Mature Secondary Structure
MMRGEPRGHRLGSKLTRRGLLRGLAVGAAVPAVSALLAACAGGQATPTPAPQPTPTAAPA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
AQPTPTAAAASPTPAAPPTPTPVVLKGTKLNILFGTFFVPETQDLMKQQLQEFGKETGVE
CCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCE
ATIDFINWPDLQPKISAAVQAGAGPDIVGMWDTWPSLYKDALVDVAEIVEKRIKGEGDYF
EEEEECCCCCCCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
DWVKKTVMVGDQWLSIPIGAPTSAQVYRKSLLEKAGWPDPNNPPDTWEDLFKIGVEFKKL
HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
GMPLGQAFGHSTGDPPSFCYAFMWAYGAMEVEADGKTVAFNKPQFVEGMKLFLSYWKPAF
CCCHHHHHCCCCCCCHHHHHHHHHHHCCEEEECCCCEEEECCCHHHHHHHHHHHHHCCHH
DETGLSWDDATNNRAFLAGQIGWTFNGSSIYIAAKKQAPDIAEDIIHHIYPKGPAGRFNN
CCCCCCCCCCCCCCEEEEEECCEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCC
LGSWSVGILKYSKNVAGAKAFLEWWTAPEQFRKWLEIQQGYQVAPTQYYLDDPYYKADPK
CCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCEEEECCCCCCCCCC
LVPYVEAAKYGRNKGYAGLGNEKAAEAFARYVVVDTFARAIQSGNAEEAIQWGASELEKI
CCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHH
YSR
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA