The gene/protein map for NC_011959 is currently unavailable.
Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

Click here to switch to the map view.

The map label for this gene is 221633067

Identifier: 221633067

GI number: 221633067

Start: 1056265

End: 1057146

Strand: Reverse

Name: 221633067

Synonym: trd_1083

Alternate gene names: NA

Gene position: 1057146-1056265 (Counterclockwise)

Preceding gene: 221633068

Following gene: 221633064

Centisome position: 52.78

GC content: 65.65

Gene sequence:

>882_bases
TTGGGTGTGCAGCGCGCCCCTCACTATCTCGCCATCGGCCATGTGACGGTCGACCTCGATCCGGACAACGGTGCACCGCG
GCTCGGTGGTACGGCCCTCTATGCAGCGTTGACGGCCGCTCGTTTCGGGATGGACGCTGCCATCCTGACGCGCGGAAACT
ACGAGACGTTCGGTGCGGACATCCGAGAGGCGCTGGCGAGGTACTCGCGTGAGGTGGCGATGATCGTGCAAGAGGCGTCT
GCGCCGACCGTCTTCACCAATCGCACCGTGGCGGGTCGTCGCGAGCAGGTTGTCCACTCGTGGGCGGGTGCGATCGATTT
GAGTGGGCTACCACCGGCCTGGCGCTCTGCACCGATCATTCATCTGGCGCCGGTGGCTCAGGAAATCGACCCTCGGCAAG
CGAGCCGGCTCAACCCCGAATTTCTCGGGGCGACGCCACAGGGTTGGATGCGAAAGTGGCCGCGAGGCGGTGGACGAGTC
CGATTGATCCCGTTGCGACTCCCCCTGGAAGTGACCACGCGTTTGGACGGACTCGTTCTCAGCACACTCGAGCATACGCT
CGCGCGTGACGAGATCGAAGCCGTCGCACAACGCGGCGTGGTGGCGATCACACGAGGACCCGATGGGGCGACCGTGATCG
ATCGAGGCCGGACGTACGATATCCCCGCTTTTTCGGTGCCGGTGCGCGACGACGTCGGGGCGGGTGACGTGTTCGCTGCC
GTCCTGTTTCTGTTGCGGGCGCAGCACGAAGGAACCTCGTGGGCAGCCAAGATGGCTGCTGCGGCGGCAGCGCTGCGCAT
TCGCGGCATCGGACCGGATGCGGTTCCCACCCGCGAAGAGGTCGAGCGCTTTCTGGATCGACTCGGTGAGCGACGGCGGT
GA

Upstream 100 bases:

>100_bases
CGTCGAGACGCGCAGCAGCGGTGAAGGGGAAGAGCGCCGCGTCACTGTCTACCCGCGTCGCTGAGGCGCGTCCTGCTGTC
TTTCGAAAGGATGCCCTCTT

Downstream 100 bases:

>100_bases
GTCTGCTGCTCAAGTGGACTGGGCGATCGCGGCGACGAGTGCCCCGGTCAGGCGGACGATCTCCTCAGGGCTGATCTCCA
GCATGGTCCGCTCGTCACCG

Product: hypothetical protein

Products: NA

Alternate protein names: PfkB Domain Protein; PfkB Domain-Containing Protein; Carbohydrate Kinase Pfkb Family

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MGVQRAPHYLAIGHVTVDLDPDNGAPRLGGTALYAALTAARFGMDAAILTRGNYETFGADIREALARYSREVAMIVQEAS
APTVFTNRTVAGRREQVVHSWAGAIDLSGLPPAWRSAPIIHLAPVAQEIDPRQASRLNPEFLGATPQGWMRKWPRGGGRV
RLIPLRLPLEVTTRLDGLVLSTLEHTLARDEIEAVAQRGVVAITRGPDGATVIDRGRTYDIPAFSVPVRDDVGAGDVFAA
VLFLLRAQHEGTSWAAKMAAAAAALRIRGIGPDAVPTREEVERFLDRLGERRR

Sequences:

>Translated_293_residues
MGVQRAPHYLAIGHVTVDLDPDNGAPRLGGTALYAALTAARFGMDAAILTRGNYETFGADIREALARYSREVAMIVQEAS
APTVFTNRTVAGRREQVVHSWAGAIDLSGLPPAWRSAPIIHLAPVAQEIDPRQASRLNPEFLGATPQGWMRKWPRGGGRV
RLIPLRLPLEVTTRLDGLVLSTLEHTLARDEIEAVAQRGVVAITRGPDGATVIDRGRTYDIPAFSVPVRDDVGAGDVFAA
VLFLLRAQHEGTSWAAKMAAAAAALRIRGIGPDAVPTREEVERFLDRLGERRR
>Mature_292_residues
GVQRAPHYLAIGHVTVDLDPDNGAPRLGGTALYAALTAARFGMDAAILTRGNYETFGADIREALARYSREVAMIVQEASA
PTVFTNRTVAGRREQVVHSWAGAIDLSGLPPAWRSAPIIHLAPVAQEIDPRQASRLNPEFLGATPQGWMRKWPRGGGRVR
LIPLRLPLEVTTRLDGLVLSTLEHTLARDEIEAVAQRGVVAITRGPDGATVIDRGRTYDIPAFSVPVRDDVGAGDVFAAV
LFLLRAQHEGTSWAAKMAAAAAALRIRGIGPDAVPTREEVERFLDRLGERRR

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31741; Mature: 31609

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVQRAPHYLAIGHVTVDLDPDNGAPRLGGTALYAALTAARFGMDAAILTRGNYETFGAD
CCCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
IREALARYSREVAMIVQEASAPTVFTNRTVAGRREQVVHSWAGAIDLSGLPPAWRSAPII
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCEECCCCCCCHHCCCEE
HLAPVAQEIDPRQASRLNPEFLGATPQGWMRKWPRGGGRVRLIPLRLPLEVTTRLDGLVL
EECCHHHHCCCHHHHHCCHHHCCCCCHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHH
STLEHTLARDEIEAVAQRGVVAITRGPDGATVIDRGRTYDIPAFSVPVRDDVGAGDVFAA
HHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCEECCCCEECCCCCCCCCHHHHHH
VLFLLRAQHEGTSWAAKMAAAAAALRIRGIGPDAVPTREEVERFLDRLGERRR
HHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GVQRAPHYLAIGHVTVDLDPDNGAPRLGGTALYAALTAARFGMDAAILTRGNYETFGAD
CCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
IREALARYSREVAMIVQEASAPTVFTNRTVAGRREQVVHSWAGAIDLSGLPPAWRSAPII
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCEECCCCCCCHHCCCEE
HLAPVAQEIDPRQASRLNPEFLGATPQGWMRKWPRGGGRVRLIPLRLPLEVTTRLDGLVL
EECCHHHHCCCHHHHHCCHHHCCCCCHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHH
STLEHTLARDEIEAVAQRGVVAITRGPDGATVIDRGRTYDIPAFSVPVRDDVGAGDVFAA
HHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCEECCCCEECCCCCCCCCHHHHHH
VLFLLRAQHEGTSWAAKMAAAAAALRIRGIGPDAVPTREEVERFLDRLGERRR
HHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA