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The map label for this gene is yraN [C]

Identifier: 221633031

GI number: 221633031

Start: 1016326

End: 1016703

Strand: Reverse

Name: yraN [C]

Synonym: trd_1046

Alternate gene names: 221633031

Gene position: 1016703-1016326 (Counterclockwise)

Preceding gene: 221633032

Following gene: 221633030

Centisome position: 50.76

GC content: 65.61

Gene sequence:

>378_bases
GTGGGACGGCAGTGCCTGGGCGAGGCGGGCGAGCGAGCGGCAGCGCGATGGCTCGAAGAGGCGGGTTGGCATGTCCTGGC
TCGCAACTGGCGGTGTCGCCAGGGTGAGTTGGACATCGTCGCTCTCGATGGGGACGTGCTGGTGGCGGTAGAGGTGAAAG
TCAGGCGGGACGCTGGAAACGAGCCAGCCGAGTGGGCTGTGACGCCTCGGAAAGGCCGTCGACTCCTGGCTGCACTGTCT
GCATTCCTCGCTGCTCATCCGGAACATCAAGAGCGACTCTGTCGCGTCGACCTCATCGCGGTCACAGTTGATCGGGGCGG
TCGAATCGTTCGCTGGAGCCACCTCCTCGGGTGCGTGAGCGAAGGGGACGGTGCATGA

Upstream 100 bases:

>100_bases
CGGCACACCGTCGCATCGACGTGCGATTCGCGAGCTCGGCTCGACGCCTTTCCACCGGCGATCGTTCCAAGTAAGGATGG
ACACGGACGAGGAGTAGTCG

Downstream 100 bases:

>100_bases
GGTGATCGATCCGCATCTTCGTGAGCGACTCTGGGCAGCGGGACGGGCGCGACGCGACGAAATGATCGCGTTCGCGCAAC
AGCTCGTGCAGACTCGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MGRQCLGEAGERAAARWLEEAGWHVLARNWRCRQGELDIVALDGDVLVAVEVKVRRDAGNEPAEWAVTPRKGRRLLAALS
AFLAAHPEHQERLCRVDLIAVTVDRGGRIVRWSHLLGCVSEGDGA

Sequences:

>Translated_125_residues
MGRQCLGEAGERAAARWLEEAGWHVLARNWRCRQGELDIVALDGDVLVAVEVKVRRDAGNEPAEWAVTPRKGRRLLAALS
AFLAAHPEHQERLCRVDLIAVTVDRGGRIVRWSHLLGCVSEGDGA
>Mature_124_residues
GRQCLGEAGERAAARWLEEAGWHVLARNWRCRQGELDIVALDGDVLVAVEVKVRRDAGNEPAEWAVTPRKGRRLLAALSA
FLAAHPEHQERLCRVDLIAVTVDRGGRIVRWSHLLGCVSEGDGA

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 13771; Mature: 13640

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRQCLGEAGERAAARWLEEAGWHVLARNWRCRQGELDIVALDGDVLVAVEVKVRRDAGN
CCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCEEEEEEEEEECCCCC
EPAEWAVTPRKGRRLLAALSAFLAAHPEHQERLCRVDLIAVTVDRGGRIVRWSHLLGCVS
CCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEEEECCCCCEEEHHHHHHHHC
EGDGA
CCCCC
>Mature Secondary Structure 
GRQCLGEAGERAAARWLEEAGWHVLARNWRCRQGELDIVALDGDVLVAVEVKVRRDAGN
CCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCEEEEEEEEEECCCCC
EPAEWAVTPRKGRRLLAALSAFLAAHPEHQERLCRVDLIAVTVDRGGRIVRWSHLLGCVS
CCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEEEECCCCCEEEHHHHHHHHC
EGDGA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA