Click here to switch to the map view.

The map label for this gene is dac [H]

Identifier: 221633027

GI number: 221633027

Start: 1012531

End: 1013235

Strand: Reverse

Name: dac [H]

Synonym: trd_1042

Alternate gene names: 221633027

Gene position: 1013235-1012531 (Counterclockwise)

Preceding gene: 221633028

Following gene: 221633026

Centisome position: 50.59

GC content: 60.71

Gene sequence:

>705_bases
GTGCGGATGAGTGACTTGACACCGCATCACCGCATCATGGTCGTGGTGGCTCATCCTGACGACATGGAATTCGGGGCTGG
TGGAACGGTTGCCCGCTTGGCCCGGGAGGGAAAGGAAATCGTTCTCGTGCAATGTACCTCCGGGGATAAAGGTACGAATC
GGCGCGACCTCACCCCCGAAGAACTCGCCCGAGAGCGAGAAGACGAAGAGCGTGAAGCGTGTCGCCGGCTCGGTGTCTCC
GAAATCGTCTTTCTTCGCTTGCCGGATGGGGAACTCATGCCGGATCTCGCGTTTCGCGAGCGGATCGTGCGACAGATCCG
GGCGTATCGTCCAGACATCGTGATTACGCATGATCCATTTCGGCCGTACGCACTGCACCCGGATCACCGGGCGGTCGGTA
TCACGACGATCGATGCGGTCTATCCGACGGCTCGCGATCCCTTGTATTTTCCCCAGCATCTCGCTGAGGGGCTGGAACCG
CACAAAGTCGCTGAACTTTGGCTTTTCGGCGCTCAATATCCCGATCTCTACGTCGATATCAGCGAGACGCTCCATCTCAA
GATCGCCGCGCTCGCTGCCCACCAGAGCCAGATCAACGATATCGAGGAGCTCGCCCAGCGCGTCCGCGAGCGTGCCGCCG
AGATCGGTGCCGAACGCGGGCTGCCTTACGCGGAAGCGTTCAAGGTGATCACGCTCCGCCGCTGA

Upstream 100 bases:

>100_bases
CGCGACCTTCGCACGGGAGAGCAAGTTCGAGTTCCACGCGCGGAACTCGTGGCTGCGGTGCGGAAACCGCTGGGCGCCGC
TCGTCAGGGCGAGAGGGGCA

Downstream 100 bases:

>100_bases
CGTGGATTTGCAACGAGTCGGTTGTCTTTCTCTTCGTCGCCTGCTATCCTGGTGATAGCTGTTCCGCGATGCCGTATGAT
ACGAGAGGCGCGGCTTGCAG

Product: GlcNAc-PI de-N-acetylase family

Products: NA

Alternate protein names: N-acetylchitobiose deacetylase; Tk-Dac [H]

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MRMSDLTPHHRIMVVVAHPDDMEFGAGGTVARLAREGKEIVLVQCTSGDKGTNRRDLTPEELAREREDEEREACRRLGVS
EIVFLRLPDGELMPDLAFRERIVRQIRAYRPDIVITHDPFRPYALHPDHRAVGITTIDAVYPTARDPLYFPQHLAEGLEP
HKVAELWLFGAQYPDLYVDISETLHLKIAALAAHQSQINDIEELAQRVRERAAEIGAERGLPYAEAFKVITLRR

Sequences:

>Translated_234_residues
MRMSDLTPHHRIMVVVAHPDDMEFGAGGTVARLAREGKEIVLVQCTSGDKGTNRRDLTPEELAREREDEEREACRRLGVS
EIVFLRLPDGELMPDLAFRERIVRQIRAYRPDIVITHDPFRPYALHPDHRAVGITTIDAVYPTARDPLYFPQHLAEGLEP
HKVAELWLFGAQYPDLYVDISETLHLKIAALAAHQSQINDIEELAQRVRERAAEIGAERGLPYAEAFKVITLRR
>Mature_234_residues
MRMSDLTPHHRIMVVVAHPDDMEFGAGGTVARLAREGKEIVLVQCTSGDKGTNRRDLTPEELAREREDEEREACRRLGVS
EIVFLRLPDGELMPDLAFRERIVRQIRAYRPDIVITHDPFRPYALHPDHRAVGITTIDAVYPTARDPLYFPQHLAEGLEP
HKVAELWLFGAQYPDLYVDISETLHLKIAALAAHQSQINDIEELAQRVRERAAEIGAERGLPYAEAFKVITLRR

Specific function: Deacylates the non-reducing end of diacetylchitobiose (GlcNAc2). Can also use N-acetylglucosamine (GlcNAc) and N- acetylchitotriose (GlcNAc3). Probably involved in chitin degradation [H]

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PIGL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003737 [H]

Pfam domain/function: PF02585 PIG-L [H]

EC number: NA

Molecular weight: Translated: 26658; Mature: 26658

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMSDLTPHHRIMVVVAHPDDMEFGAGGTVARLAREGKEIVLVQCTSGDKGTNRRDLTPE
CCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHH
ELAREREDEEREACRRLGVSEIVFLRLPDGELMPDLAFRERIVRQIRAYRPDIVITHDPF
HHHHHCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCC
RPYALHPDHRAVGITTIDAVYPTARDPLYFPQHLAEGLEPHKVAELWLFGAQYPDLYVDI
CCCEECCCCCEEEEEEEHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCEEEEE
SETLHLKIAALAAHQSQINDIEELAQRVRERAAEIGAERGLPYAEAFKVITLRR
CCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEECC
>Mature Secondary Structure
MRMSDLTPHHRIMVVVAHPDDMEFGAGGTVARLAREGKEIVLVQCTSGDKGTNRRDLTPE
CCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHH
ELAREREDEEREACRRLGVSEIVFLRLPDGELMPDLAFRERIVRQIRAYRPDIVITHDPF
HHHHHCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCC
RPYALHPDHRAVGITTIDAVYPTARDPLYFPQHLAEGLEPHKVAELWLFGAQYPDLYVDI
CCCEECCCCCEEEEEEEHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCEEEEE
SETLHLKIAALAAHQSQINDIEELAQRVRERAAEIGAERGLPYAEAFKVITLRR
CCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA