| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632998
Identifier: 221632998
GI number: 221632998
Start: 968271
End: 968684
Strand: Reverse
Name: 221632998
Synonym: trd_1007
Alternate gene names: NA
Gene position: 968684-968271 (Counterclockwise)
Preceding gene: 221633000
Following gene: 221632987
Centisome position: 48.36
GC content: 58.7
Gene sequence:
>414_bases ATGAGCCAGAGCGCAGAGTGGCGGCTTATCGACCTGGACAGTGGCCGCTGCATCGCTGAACGGGTCGAGCTTGCTGCCAG CTGGTGGAACCGGCTCCGCGGCTTGATCGGACGCAAGGAGTTCTGTGCTGCTCAGGCACTCGTGCTTCGTCCGTGCTCGG CGATCCACACCATCGGGATGCGCTTTCCGATCGATGTTCTGTTTCTCGATCACCGGGGGACAGTGCAACGTGTCGTCGAA CAGGTGCGACCACAGCGAATCGGTCCGATCCATTGGAAAAGTCAAATCGTCATAGAATTACCTGCTGGAACCGTTCGGCA GTTCGGATTAGCTCCAGGATGCAGGTTGGCTCTTTGCCGAGCCGATGGGGAAAGAGTGCCGTGGCAAGACAACTCGGTCA CCGAACCGTTCTAG
Upstream 100 bases:
>100_bases GAAGGATTCCGAAGCGAGAGAGTCGCGTTGTCAGCCTCCTGTCCGTCATCGAGCATCCGCCCGAAGCATCATGGTAGCAG GGAAAGCGAGGTGAAGCGGG
Downstream 100 bases:
>100_bases TGGCGCTTCGTGATTGCGTGGAACGCTGGTTTTTCTCGCCAACCTGCAGCGGATGTGGTTGGCCTGGTGCGTGGTGGTGC TCGGAGTGCCAGCGGAGTCT
Product: ACR protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSQSAEWRLIDLDSGRCIAERVELAASWWNRLRGLIGRKEFCAAQALVLRPCSAIHTIGMRFPIDVLFLDHRGTVQRVVE QVRPQRIGPIHWKSQIVIELPAGTVRQFGLAPGCRLALCRADGERVPWQDNSVTEPF
Sequences:
>Translated_137_residues MSQSAEWRLIDLDSGRCIAERVELAASWWNRLRGLIGRKEFCAAQALVLRPCSAIHTIGMRFPIDVLFLDHRGTVQRVVE QVRPQRIGPIHWKSQIVIELPAGTVRQFGLAPGCRLALCRADGERVPWQDNSVTEPF >Mature_136_residues SQSAEWRLIDLDSGRCIAERVELAASWWNRLRGLIGRKEFCAAQALVLRPCSAIHTIGMRFPIDVLFLDHRGTVQRVVEQ VRPQRIGPIHWKSQIVIELPAGTVRQFGLAPGCRLALCRADGERVPWQDNSVTEPF
Specific function: Unknown
COG id: COG1430
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15514; Mature: 15383
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSAEWRLIDLDSGRCIAERVELAASWWNRLRGLIGRKEFCAAQALVLRPCSAIHTIGM CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCC RFPIDVLFLDHRGTVQRVVEQVRPQRIGPIHWKSQIVIELPAGTVRQFGLAPGCRLALCR CCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCEEEEEE ADGERVPWQDNSVTEPF CCCCCCCCCCCCCCCCC >Mature Secondary Structure SQSAEWRLIDLDSGRCIAERVELAASWWNRLRGLIGRKEFCAAQALVLRPCSAIHTIGM CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCC RFPIDVLFLDHRGTVQRVVEQVRPQRIGPIHWKSQIVIELPAGTVRQFGLAPGCRLALCR CCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCEEEEEE ADGERVPWQDNSVTEPF CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA