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The map label for this gene is 221633000

Identifier: 221633000

GI number: 221633000

Start: 970888

End: 971799

Strand: Reverse

Name: 221633000

Synonym: trd_1009

Alternate gene names: NA

Gene position: 971799-970888 (Counterclockwise)

Preceding gene: 221633001

Following gene: 221632998

Centisome position: 48.52

GC content: 60.96

Gene sequence:

>912_bases
ATGCTGGCTGCTGCAAGTCTCGTTTTGGCCGCTGCTGGCCTGGTGGTGATGGTGCTCGGACTTCGGGCCGAACGCCGCCA
AGTCGTCCTCGAAGAGCGCTTGGCTCGTTTCGCACAGCGGCCCCCGTCTCTCGACGATCTCGAGCTTGCGGTTCCGTTTC
GACACCGGGTGATTCTGCCTCTGGCCGAGCGGCTCGCGCACTTCGTTTTGCGATTCACTCCTGGGGCATCGCTGCACAGG
ATCGAACAACGACTCGTCGAGGCAGGTCTGGATGGATCATTGCGCCCTTTGACGTTTCTCGGTCTCCGCTTCGGACTCGC
GCTCACCATGGCCTCCTTTGCGATCGTCCTGACTCTTGCCGGGAGTGGGCCAGTTCAGTACCGGGTTGGCTTGCCGTTCG
TACTGGCCGCTCTCGGCTGGATAGTGCCCAACGCTTGGTTGAGTAGACGGATCGCACAACGGAAACGAGCGATCCAGCGA
GCCCTTCCCGATGCTATCGACCTCTTGGTCATCAGCGTCGAGGCGGGCCTGGGGTTCGATCAGGCTTTATTGCGTGTGGT
CGAGAAATGGGATAACGAGTTGACCCGAGAGTTCGCGCGTACCCTCTCGGAGATGCGCATGGGAATTCCTCGCCGGCAGG
CGCTCCGTGATCTCGCCCGACGGGTGAACGTCGATGACTTGAACGTTTTCATTGCTTCGCTGGTCCAAGCAGACCAACTC
GGCGTCAGCATCAGCCAAGTGCTTCGGGCGCAGGCGAATCAGATGCGCTTGCGCCGGAGGCAACGCGCGCAGGAACTGGC
GCACAAGGCCCCCATCAAAATGATCTTCCCGATGGTGTTCCTCATCTTCCCTGCCTTGTATGTCGTGATCTTGGGGCCAG
CCATCCCGCGCATCGTCGAGGCGTTCCGCTAG

Upstream 100 bases:

>100_bases
GTATGCCGATCGGGGCCGTGATCTGCATGGTGCTCGGATTCGTGGTGATGCGCCGAATCGTGGCGATCGAGGTTTAGGAG
CTCGGCGTTCGGAGTGGACG

Downstream 100 bases:

>100_bases
CGAGCGACGAGAGATATCAGTCGCTCAGAGGAGGGGGATCGACCACGATCGTCGGGTCATCGAAGCGGGCGAAGGATCCA
ACCATATAGTGACCGATCGC

Product: type II secretion system protein

Products: NA

Alternate protein names: Type II Secretion System F Domain Protein; Flp Pilus Assembly Protein TadC; Type II/IV Secretion System Protein TadC Subfamily; Integral Membrane Protein; Type II Secretion System F Domain-Containing Protein; TadC Protein; Flp Pilus Assembly Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System Protein F; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; TadC Family Type II/IV Secretion System Protein; Type II Secretion System; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain; Type II Secretion System Protein F Domain Protein; Tight Adherence TadC-Related Transmembrane Protein; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Pilus Assembly Protein TadC; Putative Tight Adherence TadC-Like Transmembrane Protein; TadC Subunit; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Type II Secretion System F Protein; Component Of Type IV Pilus; Von Willebrand Factor Type A; Component Of Pilus Protein; Type II Secretion System Integral Membrane Subunit; Components Of Type IV Pilus

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MLAAASLVLAAAGLVVMVLGLRAERRQVVLEERLARFAQRPPSLDDLELAVPFRHRVILPLAERLAHFVLRFTPGASLHR
IEQRLVEAGLDGSLRPLTFLGLRFGLALTMASFAIVLTLAGSGPVQYRVGLPFVLAALGWIVPNAWLSRRIAQRKRAIQR
ALPDAIDLLVISVEAGLGFDQALLRVVEKWDNELTREFARTLSEMRMGIPRRQALRDLARRVNVDDLNVFIASLVQADQL
GVSISQVLRAQANQMRLRRRQRAQELAHKAPIKMIFPMVFLIFPALYVVILGPAIPRIVEAFR

Sequences:

>Translated_303_residues
MLAAASLVLAAAGLVVMVLGLRAERRQVVLEERLARFAQRPPSLDDLELAVPFRHRVILPLAERLAHFVLRFTPGASLHR
IEQRLVEAGLDGSLRPLTFLGLRFGLALTMASFAIVLTLAGSGPVQYRVGLPFVLAALGWIVPNAWLSRRIAQRKRAIQR
ALPDAIDLLVISVEAGLGFDQALLRVVEKWDNELTREFARTLSEMRMGIPRRQALRDLARRVNVDDLNVFIASLVQADQL
GVSISQVLRAQANQMRLRRRQRAQELAHKAPIKMIFPMVFLIFPALYVVILGPAIPRIVEAFR
>Mature_303_residues
MLAAASLVLAAAGLVVMVLGLRAERRQVVLEERLARFAQRPPSLDDLELAVPFRHRVILPLAERLAHFVLRFTPGASLHR
IEQRLVEAGLDGSLRPLTFLGLRFGLALTMASFAIVLTLAGSGPVQYRVGLPFVLAALGWIVPNAWLSRRIAQRKRAIQR
ALPDAIDLLVISVEAGLGFDQALLRVVEKWDNELTREFARTLSEMRMGIPRRQALRDLARRVNVDDLNVFIASLVQADQL
GVSISQVLRAQANQMRLRRRQRAQELAHKAPIKMIFPMVFLIFPALYVVILGPAIPRIVEAFR

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33872; Mature: 33872

Theoretical pI: Translated: 12.02; Mature: 12.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAAASLVLAAAGLVVMVLGLRAERRQVVLEERLARFAQRPPSLDDLELAVPFRHRVILP
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHH
LAERLAHFVLRFTPGASLHRIEQRLVEAGLDGSLRPLTFLGLRFGLALTMASFAIVLTLA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GSGPVQYRVGLPFVLAALGWIVPNAWLSRRIAQRKRAIQRALPDAIDLLVISVEAGLGFD
CCCCEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHH
QALLRVVEKWDNELTREFARTLSEMRMGIPRRQALRDLARRVNVDDLNVFIASLVQADQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
GVSISQVLRAQANQMRLRRRQRAQELAHKAPIKMIFPMVFLIFPALYVVILGPAIPRIVE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AFR
HCC
>Mature Secondary Structure
MLAAASLVLAAAGLVVMVLGLRAERRQVVLEERLARFAQRPPSLDDLELAVPFRHRVILP
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHH
LAERLAHFVLRFTPGASLHRIEQRLVEAGLDGSLRPLTFLGLRFGLALTMASFAIVLTLA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GSGPVQYRVGLPFVLAALGWIVPNAWLSRRIAQRKRAIQRALPDAIDLLVISVEAGLGFD
CCCCEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHH
QALLRVVEKWDNELTREFARTLSEMRMGIPRRQALRDLARRVNVDDLNVFIASLVQADQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
GVSISQVLRAQANQMRLRRRQRAQELAHKAPIKMIFPMVFLIFPALYVVILGPAIPRIVE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AFR
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA