| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632937
Identifier: 221632937
GI number: 221632937
Start: 919266
End: 919667
Strand: Reverse
Name: 221632937
Synonym: trd_0943
Alternate gene names: NA
Gene position: 919667-919266 (Counterclockwise)
Preceding gene: 221632938
Following gene: 221632935
Centisome position: 45.91
GC content: 60.95
Gene sequence:
>402_bases ATGACGGAATCGAGCGATCGCGAGTGGATCGAATCGATGCGCCGAAGACTCGAGCAGCGACGCGAGGAATTGGAGAGCCA GCGCCGCCAACTCCTCCGTATGCTGGCTGATGAGGGGCAGAGCCAAGCGGAGGAGGGGACAGTTGCCACCCACTTGGCGG ACGCGGCGAGTGATATGGTGATGGCTGAGTACGATCAGACAATGCTCCGGACACTGGAAGAGGAGTTGCACGAGGTTCTC GCAGCGCTCGAGCGCATCGATCAGGGGACCTACGGCATCTGTGTCGATTGCAAACGGCCGATCGAGCGCGAGCGATTGGA AGCTGTGCCGTGGGCTGTTCGCTGCGTGGCTGATCAAGAGCGCTTCGAGCGTGAATTGGAGCGGGCCCGCAGACTACTAT GA
Upstream 100 bases:
>100_bases GAGAACTTTTTGGTGACCCGATACGTCCGCGATGAGCTCCGGCTCTTCGAGCGACTGGTCGAGCGACAGGCAGTCCATGC CGAGAAAGGATGACGAGAAC
Downstream 100 bases:
>100_bases ATCACTGCAAAAAGGCCGTGCGATCGGGGAGATGGGGCGACGAAGAACGACGACGAAGTGGGCAGGACAAAACGAGGCCC ACCCCTAATCCACCGGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MTESSDREWIESMRRRLEQRREELESQRRQLLRMLADEGQSQAEEGTVATHLADAASDMVMAEYDQTMLRTLEEELHEVL AALERIDQGTYGICVDCKRPIERERLEAVPWAVRCVADQERFERELERARRLL
Sequences:
>Translated_133_residues MTESSDREWIESMRRRLEQRREELESQRRQLLRMLADEGQSQAEEGTVATHLADAASDMVMAEYDQTMLRTLEEELHEVL AALERIDQGTYGICVDCKRPIERERLEAVPWAVRCVADQERFERELERARRLL >Mature_132_residues TESSDREWIESMRRRLEQRREELESQRRQLLRMLADEGQSQAEEGTVATHLADAASDMVMAEYDQTMLRTLEEELHEVLA ALERIDQGTYGICVDCKRPIERERLEAVPWAVRCVADQERFERELERARRLL
Specific function: Unknown
COG id: COG1734
COG function: function code T; DnaK suppressor protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15722; Mature: 15591
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS51128 ZF_DKSA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESSDREWIESMRRRLEQRREELESQRRQLLRMLADEGQSQAEEGTVATHLADAASDMV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH MAEYDQTMLRTLEEELHEVLAALERIDQGTYGICVDCKRPIERERLEAVPWAVRCVADQE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH RFERELERARRLL HHHHHHHHHHCCC >Mature Secondary Structure TESSDREWIESMRRRLEQRREELESQRRQLLRMLADEGQSQAEEGTVATHLADAASDMV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH MAEYDQTMLRTLEEELHEVLAALERIDQGTYGICVDCKRPIERERLEAVPWAVRCVADQE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH RFERELERARRLL HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA