Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

Click here to switch to the map view.

The map label for this gene is 221632937

Identifier: 221632937

GI number: 221632937

Start: 919266

End: 919667

Strand: Reverse

Name: 221632937

Synonym: trd_0943

Alternate gene names: NA

Gene position: 919667-919266 (Counterclockwise)

Preceding gene: 221632938

Following gene: 221632935

Centisome position: 45.91

GC content: 60.95

Gene sequence:

>402_bases
ATGACGGAATCGAGCGATCGCGAGTGGATCGAATCGATGCGCCGAAGACTCGAGCAGCGACGCGAGGAATTGGAGAGCCA
GCGCCGCCAACTCCTCCGTATGCTGGCTGATGAGGGGCAGAGCCAAGCGGAGGAGGGGACAGTTGCCACCCACTTGGCGG
ACGCGGCGAGTGATATGGTGATGGCTGAGTACGATCAGACAATGCTCCGGACACTGGAAGAGGAGTTGCACGAGGTTCTC
GCAGCGCTCGAGCGCATCGATCAGGGGACCTACGGCATCTGTGTCGATTGCAAACGGCCGATCGAGCGCGAGCGATTGGA
AGCTGTGCCGTGGGCTGTTCGCTGCGTGGCTGATCAAGAGCGCTTCGAGCGTGAATTGGAGCGGGCCCGCAGACTACTAT
GA

Upstream 100 bases:

>100_bases
GAGAACTTTTTGGTGACCCGATACGTCCGCGATGAGCTCCGGCTCTTCGAGCGACTGGTCGAGCGACAGGCAGTCCATGC
CGAGAAAGGATGACGAGAAC

Downstream 100 bases:

>100_bases
ATCACTGCAAAAAGGCCGTGCGATCGGGGAGATGGGGCGACGAAGAACGACGACGAAGTGGGCAGGACAAAACGAGGCCC
ACCCCTAATCCACCGGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MTESSDREWIESMRRRLEQRREELESQRRQLLRMLADEGQSQAEEGTVATHLADAASDMVMAEYDQTMLRTLEEELHEVL
AALERIDQGTYGICVDCKRPIERERLEAVPWAVRCVADQERFERELERARRLL

Sequences:

>Translated_133_residues
MTESSDREWIESMRRRLEQRREELESQRRQLLRMLADEGQSQAEEGTVATHLADAASDMVMAEYDQTMLRTLEEELHEVL
AALERIDQGTYGICVDCKRPIERERLEAVPWAVRCVADQERFERELERARRLL
>Mature_132_residues
TESSDREWIESMRRRLEQRREELESQRRQLLRMLADEGQSQAEEGTVATHLADAASDMVMAEYDQTMLRTLEEELHEVLA
ALERIDQGTYGICVDCKRPIERERLEAVPWAVRCVADQERFERELERARRLL

Specific function: Unknown

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15722; Mature: 15591

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESSDREWIESMRRRLEQRREELESQRRQLLRMLADEGQSQAEEGTVATHLADAASDMV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
MAEYDQTMLRTLEEELHEVLAALERIDQGTYGICVDCKRPIERERLEAVPWAVRCVADQE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
RFERELERARRLL
HHHHHHHHHHCCC
>Mature Secondary Structure 
TESSDREWIESMRRRLEQRREELESQRRQLLRMLADEGQSQAEEGTVATHLADAASDMV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
MAEYDQTMLRTLEEELHEVLAALERIDQGTYGICVDCKRPIERERLEAVPWAVRCVADQE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
RFERELERARRLL
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA