| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632828
Identifier: 221632828
GI number: 221632828
Start: 800897
End: 801109
Strand: Reverse
Name: 221632828
Synonym: trd_0822
Alternate gene names: NA
Gene position: 801109-800897 (Counterclockwise)
Preceding gene: 221632829
Following gene: 221632827
Centisome position: 40.0
GC content: 64.79
Gene sequence:
>213_bases GTGACCATGGAGCGAGTGCTCGCTGGAGGATCGGTTCGCCGCGAGTTTTCGTCCGTCTCGGGGACCAAGGAGTCCGCAAC AGTGCGAATGTTCGCGTCACGCGGTCAGCGCGCGATCACGCCAAACCCGCCCGGATGCCTGAGCGAGGAGAGGCGACGAG CACAAAGGGAACCGATTCAGGGAGCACAGGGCGCTGCCATGACGGGCCGATGA
Upstream 100 bases:
>100_bases TCCGCTGGGTGCTCCGACTCAGTCGCTATCGTATTCCGGAACCGACACGATGGGCACACCGATATGCGAAAGCGGCAGCT GCCTCGAAGGACACGGGTTG
Downstream 100 bases:
>100_bases TAGGTGGGAAGCCTAGCTTCCCATATAGTGCGTATAACAGTTCTTATGCGCAGTTTTGTCGACCAGGCGCCTCGATCGGA GCATTGCACGTTGCTGACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MTMERVLAGGSVRREFSSVSGTKESATVRMFASRGQRAITPNPPGCLSEERRRAQREPIQGAQGAAMTGR
Sequences:
>Translated_70_residues MTMERVLAGGSVRREFSSVSGTKESATVRMFASRGQRAITPNPPGCLSEERRRAQREPIQGAQGAAMTGR >Mature_69_residues TMERVLAGGSVRREFSSVSGTKESATVRMFASRGQRAITPNPPGCLSEERRRAQREPIQGAQGAAMTGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7566; Mature: 7435
Theoretical pI: Translated: 12.08; Mature: 12.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMERVLAGGSVRREFSSVSGTKESATVRMFASRGQRAITPNPPGCLSEERRRAQREPIQ CCHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCC GAQGAAMTGR CCCCCCCCCC >Mature Secondary Structure TMERVLAGGSVRREFSSVSGTKESATVRMFASRGQRAITPNPPGCLSEERRRAQREPIQ CHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCC GAQGAAMTGR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA