The gene/protein map for NC_011959 is currently unavailable.
Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is yhdN [C]

Identifier: 221632798

GI number: 221632798

Start: 774574

End: 775020

Strand: Reverse

Name: yhdN [C]

Synonym: trd_0791

Alternate gene names: 221632798

Gene position: 775020-774574 (Counterclockwise)

Preceding gene: 221632801

Following gene: 221632793

Centisome position: 38.69

GC content: 58.84

Gene sequence:

>447_bases
ATGTTCTGGCTGGACCGACTCGTCGAAGAGCGTATCCGCGAAGCACAAGAGGCTGGTGCCTTCCGCAATTTGACTGGTGA
GGGGCGGCCCCTTCCACCCGACGACGGCAGTCCCAGCGAAGTATGGGCCGCACATCGGATTCTAAAAAAGAATGGGCTCC
TTCCCGATTGGTTACAGCTACGGAAGGAAATCTACACGGAGCGTGCCCTGGTTCGGCAGGCCTGGGACGAGTACTGGCGA
GCGGCAGAAGAATTCGATCGAAGCGACCCCGGGAACGTCGCCATCCTGCGTCGCTTGGCATGGCGTTATCGGGAACTGGC
CCGCGCCGTCAACAAGAAGATCGATCTCCACAATCTTCGTTGTCCATCATTGGGGCATGAACTCGTACGCTTTCCTGAGG
ACATGATCGAACGTGAGTGGCGTCGTCGCGGGGAATCCCCACCCTGA

Upstream 100 bases:

>100_bases
CCATCACCCGATCCTCTCGCTCATCCGGGGCCAGTATACGCAGACGGGTCAGCATTCAGCGAGCCAGGCTATACTTACTC
TCGAATCGGAGGAATTCCGG

Downstream 100 bases:

>100_bases
GGTTAGCTCATCGACCTCCACCGTTACCGGAGTAACCGAATAACCGCTGGAAATCTCCATCGAAGTGTTCGAGAAAAGTC
CGGATCTCCTCGACATCACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MFWLDRLVEERIREAQEAGAFRNLTGEGRPLPPDDGSPSEVWAAHRILKKNGLLPDWLQLRKEIYTERALVRQAWDEYWR
AAEEFDRSDPGNVAILRRLAWRYRELARAVNKKIDLHNLRCPSLGHELVRFPEDMIEREWRRRGESPP

Sequences:

>Translated_148_residues
MFWLDRLVEERIREAQEAGAFRNLTGEGRPLPPDDGSPSEVWAAHRILKKNGLLPDWLQLRKEIYTERALVRQAWDEYWR
AAEEFDRSDPGNVAILRRLAWRYRELARAVNKKIDLHNLRCPSLGHELVRFPEDMIEREWRRRGESPP
>Mature_148_residues
MFWLDRLVEERIREAQEAGAFRNLTGEGRPLPPDDGSPSEVWAAHRILKKNGLLPDWLQLRKEIYTERALVRQAWDEYWR
AAEEFDRSDPGNVAILRRLAWRYRELARAVNKKIDLHNLRCPSLGHELVRFPEDMIEREWRRRGESPP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17626; Mature: 17626

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFWLDRLVEERIREAQEAGAFRNLTGEGRPLPPDDGSPSEVWAAHRILKKNGLLPDWLQL
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH
RKEIYTERALVRQAWDEYWRAAEEFDRSDPGNVAILRRLAWRYRELARAVNKKIDLHNLR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
CPSLGHELVRFPEDMIEREWRRRGESPP
CCHHHHHHHHCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFWLDRLVEERIREAQEAGAFRNLTGEGRPLPPDDGSPSEVWAAHRILKKNGLLPDWLQL
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH
RKEIYTERALVRQAWDEYWRAAEEFDRSDPGNVAILRRLAWRYRELARAVNKKIDLHNLR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
CPSLGHELVRFPEDMIEREWRRRGESPP
CCHHHHHHHHCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA