Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632701

Identifier: 221632701

GI number: 221632701

Start: 679036

End: 680781

Strand: Reverse

Name: 221632701

Synonym: trd_0689

Alternate gene names: NA

Gene position: 680781-679036 (Counterclockwise)

Preceding gene: 221632702

Following gene: 221632700

Centisome position: 33.99

GC content: 62.89

Gene sequence:

>1746_bases
ATGAGCCACCGACACGGACGGGCGACCACCCCAGAAGGTGACTTGCTCGAGAGCGCGATTCATCGCCACCTCGAGCTCGA
GACACCGACCTTGCCCCTGCTCACGGAGGCCTGCAAGGCAGCTGGCAGGCACGCCTGGGGCGTGGCGATCGATGCGCTCC
TCGAGGCTGTCGCCGTCGCACCGGACCATGCTGAAGTCGCTGCTCGAGCCATCGAGATCGTGCTCCTACGTGGCGATCGA
CGCGGCGCTCGGCTTCTTTTGCGCCTGCTCCAGCGCCGATCACAGCTCGATCCCGCGTGGATCTCCCCTACCGAAGCGAT
GTTGCTCGACTGGCTGGTCAGTCACGAGGGTCGTCATTCACTCGAAGAACTGGCGCGACAATTGCTCGCTGGTCCAGCAG
CGCTTCGCAAGGCCTATCTGCCCATCGTATTGCGCCTTCTTTCTCACCAGGGGAAACACGAGACAGCGGCTACATTCCTT
GCCGCGTGGATGGAAACGTATCGCTCGGACGAAGAGGCCTGGTGGCTTCTACTCGAGGAGGCTCTGGAGAACCGAGCAAC
GGACCCGATCACCCGACTCGGACCCATCGAGACCTGGCCGCAGCCGTATACATACTGGCAATGGATACTCCTCGCTCGAA
TGGCGACGATCGCGCCTGAACCGACGTGCTGGATTCTTCTCCAAAAGATCGTCAGGGCACTTTCCTCATTCCCCCATCCT
TCGGCACGGCAGCTGTTCGTCGAACGTATCGTCGCTCATCTCGAACACGACGATCCTCGCGCGCAACTGATAGCCGCGCT
CCTCAGCAGGTACGTTGGTGTGCACGCGATCGATCCGCCTCTGCACGTCCTGTTTCGCAGTGGATCGCGCATCGCGCGAG
CGCTCGCTGCTGGCTTGCTCATTCCAGGAAGACCCGATCGGACCGATTCGGCGGCATTCAGCGAGGCGCTATCCGACCTT
ATGTCTCTTCTCACCGAGAGCGACGAGCAGGCCTCCCTCGTACGCACTCTCCTTCCCGAACTGAATCCCATGGCCATCGC
GGAGTATGCGCTCTGCTCCGAAATACCTTCGTGGCACCGGCAGGCTCTTCGTCTTCTCGAGTCATGCGGGGCGACGGCTG
CGGAACTCTCGGCACTCGCCACTCGCTTGGATCTCGCAGGCTTCCATGCCTCGGCAGGTAGCGTGTTGCGTCTCGCCGCG
AAGTTCGCGCACCAGCAGGGCGATCGCACGACTCTCCTCTCCGTTCTTCACCAACTGATACGAGTCGACCCTGGTGAGGA
TGCGGCGATCGATTTCGTCATCAACACCGAGACCCGAGCCGGCCGTACCAGTCGTGCGATTGATACACTCATCGCGGCAG
CGACACGAGCGCACGATCGAGGAGCGATCGCGCAGTCTGTCGCCCTCTTGGAGCGCGCGCAGACACTCGCTGAAATGTCG
GACGACCGACCCCGACTAGCACTCGCCGCTGAACTCCTGGCAACGACGGATGAGGGAAGCGCCGAGCGACACGTCGCCGC
AGCGACCGCCCTCTTACGTGCTGGGCATCTCGACCGGGCGCGAGCGCAGCTGTGGACAGCCCTCCGCCGATTCCTCCAAG
AACGCCGTCTCGACGATGCGCTGGCGACGGCCGAGCAACTCGTTGCATTGGATCCTGCGGATGACGCAGCTCGTGCGCAG
TTACACGAACTTCAGATCCTGCGTCGCCAGGCGCACGGGCGCGCGGCTACTCATCGGCAGGCGTAG

Upstream 100 bases:

>100_bases
TCGGCTTCGGCGCTCTCGCCTCTCCTCCTGACCACTCTCAAGCGTTTCCCCGATATTACCGAAATCTCCATGTAGGGTAC
GGCAGGGATCGCGAGGATTC

Downstream 100 bases:

>100_bases
TCGTTCCACTCCCCACGCGCTACCTCTTCGCCCGCACTGACGCGGGGGCCGCGAGCGCACCAGGTGTTAGAATTCGATCA
GCGCGCTGGAGTAGCGGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 581; Mature: 580

Protein sequence:

>581_residues
MSHRHGRATTPEGDLLESAIHRHLELETPTLPLLTEACKAAGRHAWGVAIDALLEAVAVAPDHAEVAARAIEIVLLRGDR
RGARLLLRLLQRRSQLDPAWISPTEAMLLDWLVSHEGRHSLEELARQLLAGPAALRKAYLPIVLRLLSHQGKHETAATFL
AAWMETYRSDEEAWWLLLEEALENRATDPITRLGPIETWPQPYTYWQWILLARMATIAPEPTCWILLQKIVRALSSFPHP
SARQLFVERIVAHLEHDDPRAQLIAALLSRYVGVHAIDPPLHVLFRSGSRIARALAAGLLIPGRPDRTDSAAFSEALSDL
MSLLTESDEQASLVRTLLPELNPMAIAEYALCSEIPSWHRQALRLLESCGATAAELSALATRLDLAGFHASAGSVLRLAA
KFAHQQGDRTTLLSVLHQLIRVDPGEDAAIDFVINTETRAGRTSRAIDTLIAAATRAHDRGAIAQSVALLERAQTLAEMS
DDRPRLALAAELLATTDEGSAERHVAAATALLRAGHLDRARAQLWTALRRFLQERRLDDALATAEQLVALDPADDAARAQ
LHELQILRRQAHGRAATHRQA

Sequences:

>Translated_581_residues
MSHRHGRATTPEGDLLESAIHRHLELETPTLPLLTEACKAAGRHAWGVAIDALLEAVAVAPDHAEVAARAIEIVLLRGDR
RGARLLLRLLQRRSQLDPAWISPTEAMLLDWLVSHEGRHSLEELARQLLAGPAALRKAYLPIVLRLLSHQGKHETAATFL
AAWMETYRSDEEAWWLLLEEALENRATDPITRLGPIETWPQPYTYWQWILLARMATIAPEPTCWILLQKIVRALSSFPHP
SARQLFVERIVAHLEHDDPRAQLIAALLSRYVGVHAIDPPLHVLFRSGSRIARALAAGLLIPGRPDRTDSAAFSEALSDL
MSLLTESDEQASLVRTLLPELNPMAIAEYALCSEIPSWHRQALRLLESCGATAAELSALATRLDLAGFHASAGSVLRLAA
KFAHQQGDRTTLLSVLHQLIRVDPGEDAAIDFVINTETRAGRTSRAIDTLIAAATRAHDRGAIAQSVALLERAQTLAEMS
DDRPRLALAAELLATTDEGSAERHVAAATALLRAGHLDRARAQLWTALRRFLQERRLDDALATAEQLVALDPADDAARAQ
LHELQILRRQAHGRAATHRQA
>Mature_580_residues
SHRHGRATTPEGDLLESAIHRHLELETPTLPLLTEACKAAGRHAWGVAIDALLEAVAVAPDHAEVAARAIEIVLLRGDRR
GARLLLRLLQRRSQLDPAWISPTEAMLLDWLVSHEGRHSLEELARQLLAGPAALRKAYLPIVLRLLSHQGKHETAATFLA
AWMETYRSDEEAWWLLLEEALENRATDPITRLGPIETWPQPYTYWQWILLARMATIAPEPTCWILLQKIVRALSSFPHPS
ARQLFVERIVAHLEHDDPRAQLIAALLSRYVGVHAIDPPLHVLFRSGSRIARALAAGLLIPGRPDRTDSAAFSEALSDLM
SLLTESDEQASLVRTLLPELNPMAIAEYALCSEIPSWHRQALRLLESCGATAAELSALATRLDLAGFHASAGSVLRLAAK
FAHQQGDRTTLLSVLHQLIRVDPGEDAAIDFVINTETRAGRTSRAIDTLIAAATRAHDRGAIAQSVALLERAQTLAEMSD
DRPRLALAAELLATTDEGSAERHVAAATALLRAGHLDRARAQLWTALRRFLQERRLDDALATAEQLVALDPADDAARAQL
HELQILRRQAHGRAATHRQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64022; Mature: 63891

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHRHGRATTPEGDLLESAIHRHLELETPTLPLLTEACKAAGRHAWGVAIDALLEAVAVA
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDHAEVAARAIEIVLLRGDRRGARLLLRLLQRRSQLDPAWISPTEAMLLDWLVSHEGRHS
CCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHH
LEELARQLLAGPAALRKAYLPIVLRLLSHQGKHETAATFLAAWMETYRSDEEAWWLLLEE
HHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ALENRATDPITRLGPIETWPQPYTYWQWILLARMATIAPEPTCWILLQKIVRALSSFPHP
HHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
SARQLFVERIVAHLEHDDPRAQLIAALLSRYVGVHAIDPPLHVLFRSGSRIARALAAGLL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHCCC
IPGRPDRTDSAAFSEALSDLMSLLTESDEQASLVRTLLPELNPMAIAEYALCSEIPSWHR
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHH
QALRLLESCGATAAELSALATRLDLAGFHASAGSVLRLAAKFAHQQGDRTTLLSVLHQLI
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RVDPGEDAAIDFVINTETRAGRTSRAIDTLIAAATRAHDRGAIAQSVALLERAQTLAEMS
CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DDRPRLALAAELLATTDEGSAERHVAAATALLRAGHLDRARAQLWTALRRFLQERRLDDA
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LATAEQLVALDPADDAARAQLHELQILRRQAHGRAATHRQA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SHRHGRATTPEGDLLESAIHRHLELETPTLPLLTEACKAAGRHAWGVAIDALLEAVAVA
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDHAEVAARAIEIVLLRGDRRGARLLLRLLQRRSQLDPAWISPTEAMLLDWLVSHEGRHS
CCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHH
LEELARQLLAGPAALRKAYLPIVLRLLSHQGKHETAATFLAAWMETYRSDEEAWWLLLEE
HHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ALENRATDPITRLGPIETWPQPYTYWQWILLARMATIAPEPTCWILLQKIVRALSSFPHP
HHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
SARQLFVERIVAHLEHDDPRAQLIAALLSRYVGVHAIDPPLHVLFRSGSRIARALAAGLL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHCCC
IPGRPDRTDSAAFSEALSDLMSLLTESDEQASLVRTLLPELNPMAIAEYALCSEIPSWHR
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHH
QALRLLESCGATAAELSALATRLDLAGFHASAGSVLRLAAKFAHQQGDRTTLLSVLHQLI
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RVDPGEDAAIDFVINTETRAGRTSRAIDTLIAAATRAHDRGAIAQSVALLERAQTLAEMS
CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DDRPRLALAAELLATTDEGSAERHVAAATALLRAGHLDRARAQLWTALRRFLQERRLDDA
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LATAEQLVALDPADDAARAQLHELQILRRQAHGRAATHRQA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA