Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632670

Identifier: 221632670

GI number: 221632670

Start: 648819

End: 649766

Strand: Reverse

Name: 221632670

Synonym: trd_0653

Alternate gene names: NA

Gene position: 649766-648819 (Counterclockwise)

Preceding gene: 221632671

Following gene: 221632669

Centisome position: 32.44

GC content: 63.5

Gene sequence:

>948_bases
ATGAGTTTGCTTTGGGCACTTCGTATCGGCGCACTTCTCACGCTCATCGTTCCAGCACGACTCGGCTATTGGCTTTGTCG
TGTCATCGGCATCGCTGTCTTCCTCTTCCACCCTCGCGCACGACGTGCGGTCTTGGATAACCTTCGCCACGTTTGCCCTC
GCTGCTCTCGTCTCTGGCGAACGCACCAAGCCGCGCGAGTCTTCATCACGGCAGTGATGAACTACTACGATCTCGTCCGT
ATCCGCACGGTGGATCGTCACCGCTTGCGAGAACTCATCGAGGTGCGCGGTTGGAACCACGTCGAAGCAGCGCTGGCTCG
ACAGCAGGGCGTGATCGTCCTCTCAGCTCATCTCGGTAATTTCAACGTCGTTGCTCAGTATCCGGCCGAACTCGGCCTGG
AAGCCGCGATCGTCGTCGAGCGCGTGCAGCCACCCTCACTCTTCGCCTATCTCTGCCGCTTACGAAGCGCCACAGGCGTT
CGCGTACTGCCATCCGGACCGGAAGCTGTGCCAGCGATCCTTCGGCTACTGCGTCGGAACGGGATTCTCCTCGTCGCGGG
CGACCGCGACGTGACGGGGCACAGTCGTCTCGTTCGCTTCTTCGATGCACCAGCCCGGTTACCGATCGGTCCCATCATGC
TCGCGCGACGCACCGGAGCCACGCTTCTACCCGCCTACACGATTCGCCTCTCCCCTCGCCGATCGTTGGTCGTCGTCGAC
CGACCATTGGATCTCGTCCACACGGATGATCAGGAACACGACCTGCTGGCCAACCTCGAGCTGGTCGCCCGCGCGCTGGA
GCGGATGATCCGCACTGACCCCGGCCAGTGGGCCGTGCTCCAGCCGGTGTGGGCGGACGCGTCCCCACGGACTCCACTCG
CTGAGGCACTCGGGACTGTGCCGGCGAGCGCTCCCGGAGGCACAACCCTCCAGGCCACCAGCGACTAG

Upstream 100 bases:

>100_bases
TCGAGCGCGTCATCCGCGACTACACCGATCAATGGTGGTGCTGGCGACCGTGGTGGCCCGTACCCGCTGAGAAAGCGCTA
CCCGAGCTGCAGGGGGAACG

Downstream 100 bases:

>100_bases
CCGACCTGACGTTCGCACAACGAGTGAGCATCTACACTCGTTTCTCACAGTCAAATGCTCAGCGCGGGCGGACGCCTGGA
CCTATCAGGAAGTAGGGTTA

Product: putative lipid A biosynthesis lauroyl acyltransferase

Products: NA

Alternate protein names: PIM acyltransferase [H]

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSLLWALRIGALLTLIVPARLGYWLCRVIGIAVFLFHPRARRAVLDNLRHVCPRCSRLWRTHQAARVFITAVMNYYDLVR
IRTVDRHRLRELIEVRGWNHVEAALARQQGVIVLSAHLGNFNVVAQYPAELGLEAAIVVERVQPPSLFAYLCRLRSATGV
RVLPSGPEAVPAILRLLRRNGILLVAGDRDVTGHSRLVRFFDAPARLPIGPIMLARRTGATLLPAYTIRLSPRRSLVVVD
RPLDLVHTDDQEHDLLANLELVARALERMIRTDPGQWAVLQPVWADASPRTPLAEALGTVPASAPGGTTLQATSD

Sequences:

>Translated_315_residues
MSLLWALRIGALLTLIVPARLGYWLCRVIGIAVFLFHPRARRAVLDNLRHVCPRCSRLWRTHQAARVFITAVMNYYDLVR
IRTVDRHRLRELIEVRGWNHVEAALARQQGVIVLSAHLGNFNVVAQYPAELGLEAAIVVERVQPPSLFAYLCRLRSATGV
RVLPSGPEAVPAILRLLRRNGILLVAGDRDVTGHSRLVRFFDAPARLPIGPIMLARRTGATLLPAYTIRLSPRRSLVVVD
RPLDLVHTDDQEHDLLANLELVARALERMIRTDPGQWAVLQPVWADASPRTPLAEALGTVPASAPGGTTLQATSD
>Mature_314_residues
SLLWALRIGALLTLIVPARLGYWLCRVIGIAVFLFHPRARRAVLDNLRHVCPRCSRLWRTHQAARVFITAVMNYYDLVRI
RTVDRHRLRELIEVRGWNHVEAALARQQGVIVLSAHLGNFNVVAQYPAELGLEAAIVVERVQPPSLFAYLCRLRSATGVR
VLPSGPEAVPAILRLLRRNGILLVAGDRDVTGHSRLVRFFDAPARLPIGPIMLARRTGATLLPAYTIRLSPRRSLVVVDR
PLDLVHTDDQEHDLLANLELVARALERMIRTDPGQWAVLQPVWADASPRTPLAEALGTVPASAPGGTTLQATSD

Specific function: Catalyzes the acylation to the position 6 of the alpha- 1,2-linked mannose residue of the phosphatidyl-myo-inositol dimannoside (PIM2) or monomannoside (PIM1) [H]

COG id: COG1560

COG function: function code M; Lauroyl/myristoyl acyltransferase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the htrB/msbB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004960 [H]

Pfam domain/function: PF03279 Lip_A_acyltrans [H]

EC number: NA

Molecular weight: Translated: 35010; Mature: 34878

Theoretical pI: Translated: 11.46; Mature: 11.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLWALRIGALLTLIVPARLGYWLCRVIGIAVFLFHPRARRAVLDNLRHVCPRCSRLWR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
THQAARVFITAVMNYYDLVRIRTVDRHRLRELIEVRGWNHVEAALARQQGVIVLSAHLGN
HHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCC
FNVVAQYPAELGLEAAIVVERVQPPSLFAYLCRLRSATGVRVLPSGPEAVPAILRLLRRN
EEEEEECCHHHCCCEEEHEECCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
GILLVAGDRDVTGHSRLVRFFDAPARLPIGPIMLARRTGATLLPAYTIRLSPRRSLVVVD
CEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHEECCCCCEEEEEEEEEECCCCCEEEEE
RPLDLVHTDDQEHDLLANLELVARALERMIRTDPGQWAVLQPVWADASPRTPLAEALGTV
CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHCCC
PASAPGGTTLQATSD
CCCCCCCCEEEECCC
>Mature Secondary Structure 
SLLWALRIGALLTLIVPARLGYWLCRVIGIAVFLFHPRARRAVLDNLRHVCPRCSRLWR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
THQAARVFITAVMNYYDLVRIRTVDRHRLRELIEVRGWNHVEAALARQQGVIVLSAHLGN
HHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCC
FNVVAQYPAELGLEAAIVVERVQPPSLFAYLCRLRSATGVRVLPSGPEAVPAILRLLRRN
EEEEEECCHHHCCCEEEHEECCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
GILLVAGDRDVTGHSRLVRFFDAPARLPIGPIMLARRTGATLLPAYTIRLSPRRSLVVVD
CEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHEECCCCCEEEEEEEEEECCCCCEEEEE
RPLDLVHTDDQEHDLLANLELVARALERMIRTDPGQWAVLQPVWADASPRTPLAEALGTV
CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHCCC
PASAPGGTTLQATSD
CCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA