| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632623
Identifier: 221632623
GI number: 221632623
Start: 594628
End: 595017
Strand: Reverse
Name: 221632623
Synonym: trd_0602
Alternate gene names: NA
Gene position: 595017-594628 (Counterclockwise)
Preceding gene: 221632624
Following gene: 221632620
Centisome position: 29.71
GC content: 60.26
Gene sequence:
>390_bases GTGATGAGCCTCGCCGCTTGTCGGAGAGGCGGGCAAGCAGGAGTCACCACCGTGACGGTCGAACTGGGCGAGTATTACAT CAAAGTCGACAAGGCGGAAGTTCCTGCTGGGAAAGTCCGCTTCGTCGCCAAGAACGTCGGCCAGATGGAGCACGAGCTGA TCGTCCTCCGCACCGACTTGCCGGCCGATCGTCTTCCCTACAATGAAGCTGAACAGAAAGCCGAGGAGGAACAAGCAGGC GAAGTGCTCGGCGAGATCGAGCCGGAAGATTTACCGCCCGGCAAGACGGCCGAGATGACACTCGACCTCACTGCCGGCCA TTACGTTCTCCTGTGCAATATCCCGACCCACTACAAGCAGGGGATGCACCTCGACTTGCGCGCCCGGTGA
Upstream 100 bases:
>100_bases GTGCACCCGAGTGGCCACAACGAGCACGCGCCGACGAGAAGAGAAGAGGTGGGGGAGCAGCATGCGCATGACACGACGAG CACTATTGTCTAGCGCACTG
Downstream 100 bases:
>100_bases ACAACGCTCGGTCCGGGAGGGTACCACTCCGTCCCGGGCCGAGCGCGTCTTCTCGACAATGTCAATTGGCTCTTCCACGG ACGAGCTGGAACAACAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MMSLAACRRGGQAGVTTVTVELGEYYIKVDKAEVPAGKVRFVAKNVGQMEHELIVLRTDLPADRLPYNEAEQKAEEEQAG EVLGEIEPEDLPPGKTAEMTLDLTAGHYVLLCNIPTHYKQGMHLDLRAR
Sequences:
>Translated_129_residues MMSLAACRRGGQAGVTTVTVELGEYYIKVDKAEVPAGKVRFVAKNVGQMEHELIVLRTDLPADRLPYNEAEQKAEEEQAG EVLGEIEPEDLPPGKTAEMTLDLTAGHYVLLCNIPTHYKQGMHLDLRAR >Mature_129_residues MMSLAACRRGGQAGVTTVTVELGEYYIKVDKAEVPAGKVRFVAKNVGQMEHELIVLRTDLPADRLPYNEAEQKAEEEQAG EVLGEIEPEDLPPGKTAEMTLDLTAGHYVLLCNIPTHYKQGMHLDLRAR
Specific function: Unknown
COG id: COG4454
COG function: function code P; Uncharacterized copper-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14248; Mature: 14248
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00079 MULTICOPPER_OXIDASE1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSLAACRRGGQAGVTTVTVELGEYYIKVDKAEVPAGKVRFVAKNVGQMEHELIVLRTDL CCCCHHHCCCCCCCEEEEEEEECEEEEEEECCCCCCCCEEEEHHHCCCCCEEEEEEEECC PADRLPYNEAEQKAEEEQAGEVLGEIEPEDLPPGKTAEMTLDLTAGHYVLLCNIPTHYKQ CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCHHHCC GMHLDLRAR CCEEEEEEC >Mature Secondary Structure MMSLAACRRGGQAGVTTVTVELGEYYIKVDKAEVPAGKVRFVAKNVGQMEHELIVLRTDL CCCCHHHCCCCCCCEEEEEEEECEEEEEEECCCCCCCCEEEEHHHCCCCCEEEEEEEECC PADRLPYNEAEQKAEEEQAGEVLGEIEPEDLPPGKTAEMTLDLTAGHYVLLCNIPTHYKQ CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCHHHCC GMHLDLRAR CCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA