| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632610
Identifier: 221632610
GI number: 221632610
Start: 585669
End: 585812
Strand: Reverse
Name: 221632610
Synonym: trd_0588
Alternate gene names: NA
Gene position: 585812-585669 (Counterclockwise)
Preceding gene: 221632611
Following gene: 221632609
Centisome position: 29.25
GC content: 62.5
Gene sequence:
>144_bases TTGCACGCCGGGGTCGATCTCGAGACCGTCTCGGCGATTCTCTGGCAAAGCCAGCTTTCGGTGACAGGTGACTACTTTGC TCCGATGACGGCGCAGGTGATGCAGCCAGCGCTCGCGCAGCTGAGCGTCCTGCTCCAGGACTGA
Upstream 100 bases:
>100_bases CGCACGGAACGTCACTTGCATCTTCCACCTGCTCTGCCAGCAGGCTGGGGTGCCGCCGATCCGATTCCACGACTGACGCG ATGCGGCTGCAACGCTACGC
Downstream 100 bases:
>100_bases ACAGACCGTCCACTGACGCTCGTCTCATTTTCTCACCGGCACGAGAGCCTGAGACACCGGTGAAAATTTCATTTTCCTTG TCCACATGAGGATTTTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 47
Protein sequence:
>47_residues MHAGVDLETVSAILWQSQLSVTGDYFAPMTAQVMQPALAQLSVLLQD
Sequences:
>Translated_47_residues MHAGVDLETVSAILWQSQLSVTGDYFAPMTAQVMQPALAQLSVLLQD >Mature_47_residues MHAGVDLETVSAILWQSQLSVTGDYFAPMTAQVMQPALAQLSVLLQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5076; Mature: 5076
Theoretical pI: Translated: 3.70; Mature: 3.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAGVDLETVSAILWQSQLSVTGDYFAPMTAQVMQPALAQLSVLLQD CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHAGVDLETVSAILWQSQLSVTGDYFAPMTAQVMQPALAQLSVLLQD CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA