Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632611

Identifier: 221632611

GI number: 221632611

Start: 585837

End: 585992

Strand: Reverse

Name: 221632611

Synonym: trd_0589

Alternate gene names: NA

Gene position: 585992-585837 (Counterclockwise)

Preceding gene: 221632612

Following gene: 221632610

Centisome position: 29.26

GC content: 69.23

Gene sequence:

>156_bases
GTGGCGCCAGCAGGCCCCGGGCGAGCGCGCGGCAACCCCTGGTCGCTCGTCTTCACCACGCACCTCGGTTCGCCGGTCAG
CGCACGGAACGTCACTTGCATCTTCCACCTGCTCTGCCAGCAGGCTGGGGTGCCGCCGATCCGATTCCACGACTGA

Upstream 100 bases:

>100_bases
GTGGCAACGGTTACCAGCGAAATCGAAGCAGTCTCCGTACGCTCCATGTGCCGCCGTTCGCCCGCGACGCGCTGGTGCAG
CAACACGATCAACAGCGGGC

Downstream 100 bases:

>100_bases
CGCGATGCGGCTGCAACGCTACGCTTGCACGCCGGGGTCGATCTCGAGACCGTCTCGGCGATTCTCTGGCAAAGCCAGCT
TTCGGTGACAGGTGACTACT

Product: putative integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 51; Mature: 50

Protein sequence:

>51_residues
MAPAGPGRARGNPWSLVFTTHLGSPVSARNVTCIFHLLCQQAGVPPIRFHD

Sequences:

>Translated_51_residues
MAPAGPGRARGNPWSLVFTTHLGSPVSARNVTCIFHLLCQQAGVPPIRFHD
>Mature_50_residues
APAGPGRARGNPWSLVFTTHLGSPVSARNVTCIFHLLCQQAGVPPIRFHD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5482; Mature: 5351

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPAGPGRARGNPWSLVFTTHLGSPVSARNVTCIFHLLCQQAGVPPIRFHD
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEECC
>Mature Secondary Structure 
APAGPGRARGNPWSLVFTTHLGSPVSARNVTCIFHLLCQQAGVPPIRFHD
CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA