Click here to switch to the map view.

The map label for this gene is 221632574

Identifier: 221632574

GI number: 221632574

Start: 541971

End: 542192

Strand: Reverse

Name: 221632574

Synonym: trd_0549

Alternate gene names: NA

Gene position: 542192-541971 (Counterclockwise)

Preceding gene: 221632575

Following gene: 221632573

Centisome position: 27.07

GC content: 60.36

Gene sequence:

>222_bases
TTGCAGGAGTGTTGTGCTGGTGTACCCCAGTTGCGCAGTCGTACCCCACCGTACCCCACGATTCCTGAGTTGGTGCGACA
GCTCTCGGTACCGATCCGTTCTGTCAGCTTGCGACGCCCGAGCCTGGACGATGTGTTCCTCGCTTTGACTGGCAGACAGA
TCCGCGACGAAGAACCCTCGAGCCTCGATCAGCTGCGCGAACGGATACGAGCCAGGCGTTGA

Upstream 100 bases:

>100_bases
GCGCCGGGACCGGCCAGGTCAGGATGGGTCTGACCCGGCGACACCTAGTGTAGCCGATCGAGTACCCCCGCTGGCCAGGT
CGCCGGCGGGGGTTTGTGGT

Downstream 100 bases:

>100_bases
AGATCGAAAGGACGCGCTGCTATGGCGTCGATCGAACTCACCGAGCCAGTCCGACCACCCTCACCGCTTCTGCGCGCCTC
GATCGGCGTGCTCACGCTCT

Product: multidrug ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MQECCAGVPQLRSRTPPYPTIPELVRQLSVPIRSVSLRRPSLDDVFLALTGRQIRDEEPSSLDQLRERIRARR

Sequences:

>Translated_73_residues
MQECCAGVPQLRSRTPPYPTIPELVRQLSVPIRSVSLRRPSLDDVFLALTGRQIRDEEPSSLDQLRERIRARR
>Mature_73_residues
MQECCAGVPQLRSRTPPYPTIPELVRQLSVPIRSVSLRRPSLDDVFLALTGRQIRDEEPSSLDQLRERIRARR

Specific function: Unknown

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8427; Mature: 8427

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQECCAGVPQLRSRTPPYPTIPELVRQLSVPIRSVSLRRPSLDDVFLALTGRQIRDEEPS
CCHHCCCCHHHHCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCHHHHHHHCCCCCCCCCCC
SLDQLRERIRARR
CHHHHHHHHHCCC
>Mature Secondary Structure
MQECCAGVPQLRSRTPPYPTIPELVRQLSVPIRSVSLRRPSLDDVFLALTGRQIRDEEPS
CCHHCCCCHHHHCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCHHHHHHHCCCCCCCCCCC
SLDQLRERIRARR
CHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA