| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
Click here to switch to the map view.
The map label for this gene is ureA [H]
Identifier: 221632558
GI number: 221632558
Start: 531095
End: 531391
Strand: Reverse
Name: ureA [H]
Synonym: trd_0533
Alternate gene names: 221632558
Gene position: 531391-531095 (Counterclockwise)
Preceding gene: 221632559
Following gene: 221632557
Centisome position: 26.53
GC content: 61.62
Gene sequence:
>297_bases GTGACCCCGAAGGAGCTCGACCGGTTGACCGTGTTCACTTTGGCTGAACTCGCCCGTCGCCACCGCGCACGCGGGATCAA GCTCAATTATACGGAGGCTGCTGCCCTTCTCTGCGACGAAGTGTACGAAGAAGCACGCGCTGGTCGCTCCTACGAGGAGG TGGTCGCGCATGCCAGTTCCCTCCTCACGCGCGATGACGTTCTCCCTGGTGTTCCGGAAATGCTCACCGTTCTCCACATC GACGCGCTCTTCCCTGACGGTACGCGCCTCGTGACCCTCAGGAATCCCATCCGATGA
Upstream 100 bases:
>100_bases TTCCCTATCGAACTCGATTAGAAGTGCTGACGGATGCCTCATCCCTCCAAGACTGTTCGTCCCGAATCGCGCGTTCGTCG CGGGAGCACGAGCCATGTAC
Downstream 100 bases:
>100_bases GCGAGCATCCTGTCCCGCCCGGTGGAATCATCCCTGGTCCTGATCCGATCGAAATCGATGCCCGCCTTCCCGTCACCCGC CTGCGCATCACGAATCGCGG
Product: urease subunit gamma
Products: NA
Alternate protein names: Urea amidohydrolase subunit gamma/beta [H]
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MTPKELDRLTVFTLAELARRHRARGIKLNYTEAAALLCDEVYEEARAGRSYEEVVAHASSLLTRDDVLPGVPEMLTVLHI DALFPDGTRLVTLRNPIR
Sequences:
>Translated_98_residues MTPKELDRLTVFTLAELARRHRARGIKLNYTEAAALLCDEVYEEARAGRSYEEVVAHASSLLTRDDVLPGVPEMLTVLHI DALFPDGTRLVTLRNPIR >Mature_97_residues TPKELDRLTVFTLAELARRHRARGIKLNYTEAAALLCDEVYEEARAGRSYEEVVAHASSLLTRDDVLPGVPEMLTVLHID ALFPDGTRLVTLRNPIR
Specific function: Unknown
COG id: COG0831
COG function: function code E; Urea amidohydrolase (urease) gamma subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the urease beta subunit family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002026 - InterPro: IPR002019 - InterPro: IPR008223 - ProDom: PD002319 [H]
Pfam domain/function: PF00699 Urease_beta; PF00547 Urease_gamma [H]
EC number: =3.5.1.5 [H]
Molecular weight: Translated: 11030; Mature: 10899
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPKELDRLTVFTLAELARRHRARGIKLNYTEAAALLCDEVYEEARAGRSYEEVVAHASS CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LLTRDDVLPGVPEMLTVLHIDALFPDGTRLVTLRNPIR HHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCC >Mature Secondary Structure TPKELDRLTVFTLAELARRHRARGIKLNYTEAAALLCDEVYEEARAGRSYEEVVAHASS CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LLTRDDVLPGVPEMLTVLHIDALFPDGTRLVTLRNPIR HHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12928499 [H]