Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632532

Identifier: 221632532

GI number: 221632532

Start: 504765

End: 505607

Strand: Reverse

Name: 221632532

Synonym: trd_0507

Alternate gene names: NA

Gene position: 505607-504765 (Counterclockwise)

Preceding gene: 221632533

Following gene: 221632525

Centisome position: 25.24

GC content: 61.33

Gene sequence:

>843_bases
GTGACGCTCGTGTCCGTTATGTGTGAGCTGACCGCTGACGCGATTTTCCTTTCCCCACACTTCGATGATGTTCCACTCTC
GTGCGGTGGAACCGTCGCCCTCTTCGCCGCGAGTGGTCGCAAGCCCGTCATCCTCACGCTCTTCGGCGGAGAGCCATCTG
AGCCGCTCAGTTTCTTCGCGCAGCAGCAGCACCGATGGCGGGGCATGGACGATCGGACGGCTGTCCAATTGCGGCGCGAG
GAAGAGCGTGCCGCCGCTGCCGAACTCGGGGCGACGGCACACTGGTTCGATGTCCCGGACGCAATTTACCGCGATGCCCG
TTACAACTCGGACGACGAACTCTTCGGACCTCTCCACCCCGATGATCTGGTGCTGGTCGATGAGCTCCTCGATCTCGTCG
AAGAGGTGATCCGCTCCCACGCCGAATCACCGGCGATTTTCGTTCCCCTCGCTCTCGGCAACCACGTCGATCACCAAATC
GCGCGTCTGCTCGGTACACGCCTGGTCGAACGAGGTTTTTCCGTTTGGGCCTACGAGGATCAACCGTACAGCGCCATGCC
AGGGAGCCAGGCCGAGCGCGACTGCACCATCCAGCGCTGGACAGCCGGTCCGCCATGGCTCGTCTTTCTTTCGGAGGAGC
TCTTCCAGAGACGCCTGCGAGCGATCAGTCATTATCGAAGCCAGATCGCTTTCGTCTTTCGTGACCTCGGCCCCTTCGAT
CGAGTTCTCCGGTCGTATACGTTGGAAGTCGGACGAGGCCAACTCGCCGAGCGTTTTTGGGAACTCCAGCCACTTTCGAC
CGTCGAGAGAGCGCCCGAACAACGGAGAGGCGAACTGTGCTGA

Upstream 100 bases:

>100_bases
GTGACGCTCGCTCAAGTACGTGATGCACTCGGGACGAGTCGCAAGTACGCGCAGGCACTCCTCGAGTACCTCGACCAACA
GCGGGTTACCAGACGGATCG

Downstream 100 bases:

>100_bases
GTTGCTCGTGGGCAAGCGCCAGTAACCGCTCGCCGGCGCTCCTCCCGTCTCACCGCCCTCTCTGCCAATCGCGATCATGA
CGAGCGGGAGAGATTCTGGA

Product: MitC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MTLVSVMCELTADAIFLSPHFDDVPLSCGGTVALFAASGRKPVILTLFGGEPSEPLSFFAQQQHRWRGMDDRTAVQLRRE
EERAAAAELGATAHWFDVPDAIYRDARYNSDDELFGPLHPDDLVLVDELLDLVEEVIRSHAESPAIFVPLALGNHVDHQI
ARLLGTRLVERGFSVWAYEDQPYSAMPGSQAERDCTIQRWTAGPPWLVFLSEELFQRRLRAISHYRSQIAFVFRDLGPFD
RVLRSYTLEVGRGQLAERFWELQPLSTVERAPEQRRGELC

Sequences:

>Translated_280_residues
MTLVSVMCELTADAIFLSPHFDDVPLSCGGTVALFAASGRKPVILTLFGGEPSEPLSFFAQQQHRWRGMDDRTAVQLRRE
EERAAAAELGATAHWFDVPDAIYRDARYNSDDELFGPLHPDDLVLVDELLDLVEEVIRSHAESPAIFVPLALGNHVDHQI
ARLLGTRLVERGFSVWAYEDQPYSAMPGSQAERDCTIQRWTAGPPWLVFLSEELFQRRLRAISHYRSQIAFVFRDLGPFD
RVLRSYTLEVGRGQLAERFWELQPLSTVERAPEQRRGELC
>Mature_279_residues
TLVSVMCELTADAIFLSPHFDDVPLSCGGTVALFAASGRKPVILTLFGGEPSEPLSFFAQQQHRWRGMDDRTAVQLRREE
ERAAAAELGATAHWFDVPDAIYRDARYNSDDELFGPLHPDDLVLVDELLDLVEEVIRSHAESPAIFVPLALGNHVDHQIA
RLLGTRLVERGFSVWAYEDQPYSAMPGSQAERDCTIQRWTAGPPWLVFLSEELFQRRLRAISHYRSQIAFVFRDLGPFDR
VLRSYTLEVGRGQLAERFWELQPLSTVERAPEQRRGELC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31767; Mature: 31636

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLVSVMCELTADAIFLSPHFDDVPLSCGGTVALFAASGRKPVILTLFGGEPSEPLSFFA
CHHHHHHHHHHHCEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHH
QQQHRWRGMDDRTAVQLRREEERAAAAELGATAHWFDVPDAIYRDARYNSDDELFGPLHP
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHCCCCCCCCCCCCCCCC
DDLVLVDELLDLVEEVIRSHAESPAIFVPLALGNHVDHQIARLLGTRLVERGFSVWAYED
CHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECC
QPYSAMPGSQAERDCTIQRWTAGPPWLVFLSEELFQRRLRAISHYRSQIAFVFRDLGPFD
CCCCCCCCCCCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
RVLRSYTLEVGRGQLAERFWELQPLSTVERAPEQRRGELC
HHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCHHHCCCCC
>Mature Secondary Structure 
TLVSVMCELTADAIFLSPHFDDVPLSCGGTVALFAASGRKPVILTLFGGEPSEPLSFFA
HHHHHHHHHHHCEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHH
QQQHRWRGMDDRTAVQLRREEERAAAAELGATAHWFDVPDAIYRDARYNSDDELFGPLHP
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHCCCCCCCCCCCCCCCC
DDLVLVDELLDLVEEVIRSHAESPAIFVPLALGNHVDHQIARLLGTRLVERGFSVWAYED
CHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECC
QPYSAMPGSQAERDCTIQRWTAGPPWLVFLSEELFQRRLRAISHYRSQIAFVFRDLGPFD
CCCCCCCCCCCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
RVLRSYTLEVGRGQLAERFWELQPLSTVERAPEQRRGELC
HHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA