Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632525

Identifier: 221632525

GI number: 221632525

Start: 495863

End: 496153

Strand: Reverse

Name: 221632525

Synonym: trd_0499

Alternate gene names: NA

Gene position: 496153-495863 (Counterclockwise)

Preceding gene: 221632532

Following gene: 221632524

Centisome position: 24.77

GC content: 63.57

Gene sequence:

>291_bases
ATGACTCGACCGCAGCGGGAAAAATCGCGCTTCCATGCTGACCACGCATCTCTCCCCATCAGCGACGAGCTCTGGTTCCC
GCGTCCGACAACGGTCGCAACACGCGCTCCGCCGTACTCGGCTCGCGTCGCCGACGTTCACCTCGTGGGAAGGCACAACG
CTGAAACCGGGAGTTCGCTGCCAGCGCGACTCAGTGTGAAGAAGACGACCGGTCTCCGCAAGATCCATCGCGGCACCAGA
AGTCGAACGCGGCACCGAGAGCGACCAGCGGGCAACTGGTCGCTATGCTAG

Upstream 100 bases:

>100_bases
ATCGCCCCCGTCCTCGCCCAGGGATCGCTGAGTCGGCCCATCTATGGACCATACGCGGTGCGCCCCGATCGCCCTCTGCC
GACGAGCCGGCTACCGCTCG

Downstream 100 bases:

>100_bases
CATGGCGTGAGGGAGACCAGTATGGGACGCTTGCTCGTCGGAACTTCGTCCTGGACTGACCACGAGGGTTTCTATCCACC
AGGGATCGAAGCCCGCGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MTRPQREKSRFHADHASLPISDELWFPRPTTVATRAPPYSARVADVHLVGRHNAETGSSLPARLSVKKTTGLRKIHRGTR
SRTRHRERPAGNWSLC

Sequences:

>Translated_96_residues
MTRPQREKSRFHADHASLPISDELWFPRPTTVATRAPPYSARVADVHLVGRHNAETGSSLPARLSVKKTTGLRKIHRGTR
SRTRHRERPAGNWSLC
>Mature_95_residues
TRPQREKSRFHADHASLPISDELWFPRPTTVATRAPPYSARVADVHLVGRHNAETGSSLPARLSVKKTTGLRKIHRGTRS
RTRHRERPAGNWSLC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10888; Mature: 10757

Theoretical pI: Translated: 12.22; Mature: 12.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPQREKSRFHADHASLPISDELWFPRPTTVATRAPPYSARVADVHLVGRHNAETGSSL
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCCCCC
PARLSVKKTTGLRKIHRGTRSRTRHRERPAGNWSLC
CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TRPQREKSRFHADHASLPISDELWFPRPTTVATRAPPYSARVADVHLVGRHNAETGSSL
CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCCCCC
PARLSVKKTTGLRKIHRGTRSRTRHRERPAGNWSLC
CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA