Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632499

Identifier: 221632499

GI number: 221632499

Start: 469082

End: 471022

Strand: Reverse

Name: 221632499

Synonym: trd_0473

Alternate gene names: NA

Gene position: 471022-469082 (Counterclockwise)

Preceding gene: 221632500

Following gene: 221632497

Centisome position: 23.52

GC content: 64.66

Gene sequence:

>1941_bases
ATGCGCCCCCTGCTCGTCGTGCTACATGACCGGCCGCTGCAAAGTTTGCGGGCAGCCGGACGTTTCTGGGAGATCGCTCC
CACCGAGAGCGCTGCGGAACTCACTGGTCTCCTCTATCCCATCCTCACCGACGCATGGCAGGTGGCGTTGGCACTGGAAC
GGCTGGGTGAACTGGCCGAGGCTGCCCTTTGCATCCTCGCTGAGCGACGTCTTCCGCTCTCCCCCAACGAGATCGCACGA
GCGCTCGGCCGAGACGAGGGAGCGACGATCGCGGTCCTCCGCCAACTCTACGTGGCCGGTCTACTGGCCAGCGAGCCATC
CGGTGAGGGGCCGCGCGTCTTCCTGCCAAACGAGGTCGCTCGCGTGATCCAGCGACTGGAGCACGAGCGGTCTGATCCGA
TCGGGCCGGATGGTCCGCTCCCTGCACTCTTCGGTCAGCTCACCGATCATGAGTTGCTCGAACTGGCCGAGCGATACGGC
TTGGCAGTCATTCCCTCCGTCACCAGTCGAGATCAGGCCCTCGGGTATCTCGTCTCCCGGCTCGTCGACCCGACGGTTCT
CTACCGCATCTGCACCGGGCTTTCCCCGCGTGCTCGGCAGCTGCTGACCCATCTCGAGAGCCGTCGTGCGCCTATACCCC
TGAGTGAGCTCCTGCGCGATCGTCGCTGGACGTTCGGCGAACTCCGTCGCACTGTTAGTGAACTTGCCCGCTATGGATTG
GTCTGGCGGACATTCGAGGGCAGCGCCCGCTGTCTCATGGTTCTCCCGACGTTGACCCTCGGTACTTCCTCGACACCGAC
TCCACAGCCGATCGACGACGTCTCGGTCACCACTCAGGCTCCTCCCCAGGCGGCTGTTCTCGACCTCCTGCTACTCCTCG
CGTGCTCGCTTCGCTCCGGCACAGCCTGGCCTCGCGAGAGCCGGCCCCCCCGACCACTCGTCGCTGCGATCGCACGCCAG
CACTGGTTCTGGGAAGATGCAAGCGATTCCCTCGCCTACTTCATCTTCCTTCGTCGCTGTGCGGGATCGCTCGGCCTGCT
CACGCCGCAGGGTGAACTCGCTCGCCCCCGTCTTGCAGCCTGGCTCCGTGCTTCGTTCGCCGAGCAAGGACGACGACTGT
TTCGAGTCTGGAGCGCAACGAGTGACCCACGCGATCGTGAACTGCTGCCAGCACTGGTCCGGCAACTCCGCACCCTCCGG
GTCGGTGCGTGGTACGCGTGGAACGAAGTGGTTCGCGAGAGTCTCGGCGGCACTTCCAGCGAACGAGAAGAAGCACGACT
GCAGGAATTGGAGTGGTTAGGGATCGTGCAGCGTGGGCGGACGGCTGACGGCACCCGAGCAATCCGCCTCACGAGCTGGG
GAAGCTGGGCACTGGGGATCCTGCGCTCCGTTCCCCAAATCGACATGCGCGCTCTCTTCCAGACTGAGAATGGTCTCACG
CTCGAGCTCCCCGTTCTCACCCCCGAAATCACGTGGATCGCCTCGCAACTGGGTACCCTCCAGTCTTCTCGTCCCGTCCC
GACGTGGCTCCTTTCAGCCCGCACGGTCGAGGATTTCGTCCGGACGGAACTCCGTTCAGGATCGTTCTCGCTCTCCCTCA
CCGATCTTCCCACCGCAGTGATCGAGCTCCTGGAACGCGCGCTCGGATCACCGCTCCCGTCCAGCTGGCAAGAATCCGTC
CGCGCTTGGCTCGCGCACAGCAGACCGGCAGTCGTCCGCCCGGCACTCGCGGTGCGCTTCGCGAGCACGAGCGATCGTGA
CCAGGCCTGGGCGCTCCTCGAAAAAGTCGTCGAGTCGATCACCCCTCTCGACGACACGACGCTCGTCGCTTGGCTTCCCG
AAACGAGGGTCCGCAGGACCATCGAGTCAGTGCTCCGAAAAGGCGGCTTCCTCGTCGAACTGCAGGATCATGCCGGTACC
GACCATCGGACGAAGCGCTAG

Upstream 100 bases:

>100_bases
GGAGAGAGGCTGACACCGTCCAACTGGTCACGCTTGCCACCGCGCCTTGCCAGCGCATACAGTTGCGCTCGAAGTGTGGA
CAACGAGCGGAGCGAAACGG

Downstream 100 bases:

>100_bases
GTGCTCACGACACCCCACTTCATGCTCTACTGAGGAGACCTCGTTGCACGCTCTTGTGCAGCACGCTCGGCTCGGATGAA
AACGAGCGCTTGCGCAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 646; Mature: 646

Protein sequence:

>646_residues
MRPLLVVLHDRPLQSLRAAGRFWEIAPTESAAELTGLLYPILTDAWQVALALERLGELAEAALCILAERRLPLSPNEIAR
ALGRDEGATIAVLRQLYVAGLLASEPSGEGPRVFLPNEVARVIQRLEHERSDPIGPDGPLPALFGQLTDHELLELAERYG
LAVIPSVTSRDQALGYLVSRLVDPTVLYRICTGLSPRARQLLTHLESRRAPIPLSELLRDRRWTFGELRRTVSELARYGL
VWRTFEGSARCLMVLPTLTLGTSSTPTPQPIDDVSVTTQAPPQAAVLDLLLLLACSLRSGTAWPRESRPPRPLVAAIARQ
HWFWEDASDSLAYFIFLRRCAGSLGLLTPQGELARPRLAAWLRASFAEQGRRLFRVWSATSDPRDRELLPALVRQLRTLR
VGAWYAWNEVVRESLGGTSSEREEARLQELEWLGIVQRGRTADGTRAIRLTSWGSWALGILRSVPQIDMRALFQTENGLT
LELPVLTPEITWIASQLGTLQSSRPVPTWLLSARTVEDFVRTELRSGSFSLSLTDLPTAVIELLERALGSPLPSSWQESV
RAWLAHSRPAVVRPALAVRFASTSDRDQAWALLEKVVESITPLDDTTLVAWLPETRVRRTIESVLRKGGFLVELQDHAGT
DHRTKR

Sequences:

>Translated_646_residues
MRPLLVVLHDRPLQSLRAAGRFWEIAPTESAAELTGLLYPILTDAWQVALALERLGELAEAALCILAERRLPLSPNEIAR
ALGRDEGATIAVLRQLYVAGLLASEPSGEGPRVFLPNEVARVIQRLEHERSDPIGPDGPLPALFGQLTDHELLELAERYG
LAVIPSVTSRDQALGYLVSRLVDPTVLYRICTGLSPRARQLLTHLESRRAPIPLSELLRDRRWTFGELRRTVSELARYGL
VWRTFEGSARCLMVLPTLTLGTSSTPTPQPIDDVSVTTQAPPQAAVLDLLLLLACSLRSGTAWPRESRPPRPLVAAIARQ
HWFWEDASDSLAYFIFLRRCAGSLGLLTPQGELARPRLAAWLRASFAEQGRRLFRVWSATSDPRDRELLPALVRQLRTLR
VGAWYAWNEVVRESLGGTSSEREEARLQELEWLGIVQRGRTADGTRAIRLTSWGSWALGILRSVPQIDMRALFQTENGLT
LELPVLTPEITWIASQLGTLQSSRPVPTWLLSARTVEDFVRTELRSGSFSLSLTDLPTAVIELLERALGSPLPSSWQESV
RAWLAHSRPAVVRPALAVRFASTSDRDQAWALLEKVVESITPLDDTTLVAWLPETRVRRTIESVLRKGGFLVELQDHAGT
DHRTKR
>Mature_646_residues
MRPLLVVLHDRPLQSLRAAGRFWEIAPTESAAELTGLLYPILTDAWQVALALERLGELAEAALCILAERRLPLSPNEIAR
ALGRDEGATIAVLRQLYVAGLLASEPSGEGPRVFLPNEVARVIQRLEHERSDPIGPDGPLPALFGQLTDHELLELAERYG
LAVIPSVTSRDQALGYLVSRLVDPTVLYRICTGLSPRARQLLTHLESRRAPIPLSELLRDRRWTFGELRRTVSELARYGL
VWRTFEGSARCLMVLPTLTLGTSSTPTPQPIDDVSVTTQAPPQAAVLDLLLLLACSLRSGTAWPRESRPPRPLVAAIARQ
HWFWEDASDSLAYFIFLRRCAGSLGLLTPQGELARPRLAAWLRASFAEQGRRLFRVWSATSDPRDRELLPALVRQLRTLR
VGAWYAWNEVVRESLGGTSSEREEARLQELEWLGIVQRGRTADGTRAIRLTSWGSWALGILRSVPQIDMRALFQTENGLT
LELPVLTPEITWIASQLGTLQSSRPVPTWLLSARTVEDFVRTELRSGSFSLSLTDLPTAVIELLERALGSPLPSSWQESV
RAWLAHSRPAVVRPALAVRFASTSDRDQAWALLEKVVESITPLDDTTLVAWLPETRVRRTIESVLRKGGFLVELQDHAGT
DHRTKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71997; Mature: 71997

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLLVVLHDRPLQSLRAAGRFWEIAPTESAAELTGLLYPILTDAWQVALALERLGELAE
CCCEEEEECCCCHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALCILAERRLPLSPNEIARALGRDEGATIAVLRQLYVAGLLASEPSGEGPRVFLPNEVA
HHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHH
RVIQRLEHERSDPIGPDGPLPALFGQLTDHELLELAERYGLAVIPSVTSRDQALGYLVSR
HHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHH
LVDPTVLYRICTGLSPRARQLLTHLESRRAPIPLSELLRDRRWTFGELRRTVSELARYGL
HHCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCC
VWRTFEGSARCLMVLPTLTLGTSSTPTPQPIDDVSVTTQAPPQAAVLDLLLLLACSLRSG
EEEECCCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
TAWPRESRPPRPLVAAIARQHWFWEDASDSLAYFIFLRRCAGSLGLLTPQGELARPRLAA
CCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
WLRASFAEQGRRLFRVWSATSDPRDRELLPALVRQLRTLRVGAWYAWNEVVRESLGGTSS
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
EREEARLQELEWLGIVQRGRTADGTRAIRLTSWGSWALGILRSVPQIDMRALFQTENGLT
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHCCCCCCE
LELPVLTPEITWIASQLGTLQSSRPVPTWLLSARTVEDFVRTELRSGSFSLSLTDLPTAV
EEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH
IELLERALGSPLPSSWQESVRAWLAHSRPAVVRPALAVRFASTSDRDQAWALLEKVVESI
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHCHHHHEEECCCCCHHHHHHHHHHHHHHH
TPLDDTTLVAWLPETRVRRTIESVLRKGGFLVELQDHAGTDHRTKR
CCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MRPLLVVLHDRPLQSLRAAGRFWEIAPTESAAELTGLLYPILTDAWQVALALERLGELAE
CCCEEEEECCCCHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALCILAERRLPLSPNEIARALGRDEGATIAVLRQLYVAGLLASEPSGEGPRVFLPNEVA
HHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHH
RVIQRLEHERSDPIGPDGPLPALFGQLTDHELLELAERYGLAVIPSVTSRDQALGYLVSR
HHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHH
LVDPTVLYRICTGLSPRARQLLTHLESRRAPIPLSELLRDRRWTFGELRRTVSELARYGL
HHCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCC
VWRTFEGSARCLMVLPTLTLGTSSTPTPQPIDDVSVTTQAPPQAAVLDLLLLLACSLRSG
EEEECCCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
TAWPRESRPPRPLVAAIARQHWFWEDASDSLAYFIFLRRCAGSLGLLTPQGELARPRLAA
CCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
WLRASFAEQGRRLFRVWSATSDPRDRELLPALVRQLRTLRVGAWYAWNEVVRESLGGTSS
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
EREEARLQELEWLGIVQRGRTADGTRAIRLTSWGSWALGILRSVPQIDMRALFQTENGLT
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHCCCCCCE
LELPVLTPEITWIASQLGTLQSSRPVPTWLLSARTVEDFVRTELRSGSFSLSLTDLPTAV
EEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH
IELLERALGSPLPSSWQESVRAWLAHSRPAVVRPALAVRFASTSDRDQAWALLEKVVESI
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHCHHHHEEECCCCCHHHHHHHHHHHHHHH
TPLDDTTLVAWLPETRVRRTIESVLRKGGFLVELQDHAGTDHRTKR
CCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA