Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632500

Identifier: 221632500

GI number: 221632500

Start: 471206

End: 472387

Strand: Reverse

Name: 221632500

Synonym: trd_0474

Alternate gene names: NA

Gene position: 472387-471206 (Counterclockwise)

Preceding gene: 221632501

Following gene: 221632499

Centisome position: 23.58

GC content: 62.86

Gene sequence:

>1182_bases
GTGCACGGTGACGAACAGCACTTGCTCGCTTCCGTGCACGGCAGATATACTGAGTGGCGAGTCTCCCGTCCCGGGCACTG
GTACGATCGTCGATTTTCGCCGAATCCAGTCTTGAGGGCCCGGGCGGACGACGCAGGTCCAAACGGCGTCGCCCGGGCTC
GTCCGTTCATGATCGGCGGGGACACGATGCGCCGAGGAGTGCTTGTCTTTGTCATCGCTGGAGTTTTCAGCTTCGTCGCC
TGGTCCTTTCGGGATCCGGAGATGGTTACCGGTACCCTCGAACGCTTGTCTCCCCGCGTGGTACTCGCTCTCTTGCTCGT
GCTCAGCGCGAACGAGGCAATCAAAGCCATCCGTTGGGCCTGGTATCTCCGGGCAGCACAACTTCCCCTTCGCTTCCGCG
ATAGCATCACCAGCTATCTGGCTGCTCAAGCCGCGAGTGCCCTGCCTGGTGGCTCGATCCTCTCCGCCCGCCTCGCCGAA
GAGCACGCAAAGGGTCGTATCGGCTTGCGTCACACTGCTCCCCCACTCATCGCACAGGGTCTCGGTGATGTCTTCGCTGT
CGCTCTCTTGGCGCTCATCGGGATCGCTGCTTCCCCCCAGCCGAACGCGCAACTCGTGGCACCGGTGGCAGCCCTGATCC
TCGCGCTCCTCCTCATCACGATCGCCCGCTCCGAGCGATCCGGTACCGCCCTCGTCGGTGTGCTGCGACGTTGGCGCCTG
ACGCGACGACTGGTTCCAGTCGAGGAAGACGCTCGTCGCACACTGGTCGCCCTGTTGAATGGTCGTGCCCTCATTCCAGG
AACCATGACCAGTATCGCTTCCTCGCTGTGTGCGGTCGCGATCCTGATCATGCTGGCCAATGCGTTGACGGTGCGCGGAC
TCGCACCGTTGGAGGGGCTCTATGTGCACGGGATGTCGATGCTCGCGCACCTTTTCCTGCCTGTTCCCAATGGCTTCGGC
ACGACAGAGATCAGTCTGGTCGGTCTCCTCAACTGGATCGGCATCGGATTCGGCCGCGCGACTGCGATCGCCATCACCTA
TCGTGCTCTCGGGATCGGGTTCCGCACGCTGATCGGGCTGGCTGTCCTGCTGCTCCGTTACCATCATCTCATCCAGCTGC
GCTCGCCTGCACAACCGGTTCCGACGACCCTACTCGACGTCGCGTCGGAAGCCAGCGATTAG

Upstream 100 bases:

>100_bases
TGGAGTGGTGGCCTGACCGTATCGGTCAGCCAGACGAGATCACGCGTGGACGCATCGTTGCCGAAATCGTCGCGGCCCAG
TATCCATAGCACGACGAAAC

Downstream 100 bases:

>100_bases
CGCCCGTCTCTCGTCTCCCCAGTGGACAAACGGCGATCTGGTTGACGCTTTCCGCTGAGGAGCCCATTCCGATGGGTTCA
TCGGGAGAGAGGCTGACACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MHGDEQHLLASVHGRYTEWRVSRPGHWYDRRFSPNPVLRARADDAGPNGVARARPFMIGGDTMRRGVLVFVIAGVFSFVA
WSFRDPEMVTGTLERLSPRVVLALLLVLSANEAIKAIRWAWYLRAAQLPLRFRDSITSYLAAQAASALPGGSILSARLAE
EHAKGRIGLRHTAPPLIAQGLGDVFAVALLALIGIAASPQPNAQLVAPVAALILALLLITIARSERSGTALVGVLRRWRL
TRRLVPVEEDARRTLVALLNGRALIPGTMTSIASSLCAVAILIMLANALTVRGLAPLEGLYVHGMSMLAHLFLPVPNGFG
TTEISLVGLLNWIGIGFGRATAIAITYRALGIGFRTLIGLAVLLLRYHHLIQLRSPAQPVPTTLLDVASEASD

Sequences:

>Translated_393_residues
MHGDEQHLLASVHGRYTEWRVSRPGHWYDRRFSPNPVLRARADDAGPNGVARARPFMIGGDTMRRGVLVFVIAGVFSFVA
WSFRDPEMVTGTLERLSPRVVLALLLVLSANEAIKAIRWAWYLRAAQLPLRFRDSITSYLAAQAASALPGGSILSARLAE
EHAKGRIGLRHTAPPLIAQGLGDVFAVALLALIGIAASPQPNAQLVAPVAALILALLLITIARSERSGTALVGVLRRWRL
TRRLVPVEEDARRTLVALLNGRALIPGTMTSIASSLCAVAILIMLANALTVRGLAPLEGLYVHGMSMLAHLFLPVPNGFG
TTEISLVGLLNWIGIGFGRATAIAITYRALGIGFRTLIGLAVLLLRYHHLIQLRSPAQPVPTTLLDVASEASD
>Mature_393_residues
MHGDEQHLLASVHGRYTEWRVSRPGHWYDRRFSPNPVLRARADDAGPNGVARARPFMIGGDTMRRGVLVFVIAGVFSFVA
WSFRDPEMVTGTLERLSPRVVLALLLVLSANEAIKAIRWAWYLRAAQLPLRFRDSITSYLAAQAASALPGGSILSARLAE
EHAKGRIGLRHTAPPLIAQGLGDVFAVALLALIGIAASPQPNAQLVAPVAALILALLLITIARSERSGTALVGVLRRWRL
TRRLVPVEEDARRTLVALLNGRALIPGTMTSIASSLCAVAILIMLANALTVRGLAPLEGLYVHGMSMLAHLFLPVPNGFG
TTEISLVGLLNWIGIGFGRATAIAITYRALGIGFRTLIGLAVLLLRYHHLIQLRSPAQPVPTTLLDVASEASD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42331; Mature: 42331

Theoretical pI: Translated: 11.64; Mature: 11.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGDEQHLLASVHGRYTEWRVSRPGHWYDRRFSPNPVLRARADDAGPNGVARARPFMIGG
CCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCHHCCCEEECC
DTMRRGVLVFVIAGVFSFVAWSFRDPEMVTGTLERLSPRVVLALLLVLSANEAIKAIRWA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHH
WYLRAAQLPLRFRDSITSYLAAQAASALPGGSILSARLAEEHAKGRIGLRHTAPPLIAQG
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LGDVFAVALLALIGIAASPQPNAQLVAPVAALILALLLITIARSERSGTALVGVLRRWRL
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
TRRLVPVEEDARRTLVALLNGRALIPGTMTSIASSLCAVAILIMLANALTVRGLAPLEGL
HHHCCCCCHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
YVHGMSMLAHLFLPVPNGFGTTEISLVGLLNWIGIGFGRATAIAITYRALGIGFRTLIGL
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AVLLLRYHHLIQLRSPAQPVPTTLLDVASEASD
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MHGDEQHLLASVHGRYTEWRVSRPGHWYDRRFSPNPVLRARADDAGPNGVARARPFMIGG
CCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCHHCCCEEECC
DTMRRGVLVFVIAGVFSFVAWSFRDPEMVTGTLERLSPRVVLALLLVLSANEAIKAIRWA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHH
WYLRAAQLPLRFRDSITSYLAAQAASALPGGSILSARLAEEHAKGRIGLRHTAPPLIAQG
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LGDVFAVALLALIGIAASPQPNAQLVAPVAALILALLLITIARSERSGTALVGVLRRWRL
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
TRRLVPVEEDARRTLVALLNGRALIPGTMTSIASSLCAVAILIMLANALTVRGLAPLEGL
HHHCCCCCHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
YVHGMSMLAHLFLPVPNGFGTTEISLVGLLNWIGIGFGRATAIAITYRALGIGFRTLIGL
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AVLLLRYHHLIQLRSPAQPVPTTLLDVASEASD
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA