| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632493
Identifier: 221632493
GI number: 221632493
Start: 463085
End: 464479
Strand: Reverse
Name: 221632493
Synonym: trd_0467
Alternate gene names: NA
Gene position: 464479-463085 (Counterclockwise)
Preceding gene: 221632494
Following gene: 221632492
Centisome position: 23.19
GC content: 62.08
Gene sequence:
>1395_bases ATGGCGACACACGGTCACGCACACGGTCATGAACTCCAACGCACCTGGGAACTCGCACCGGCGGACGTGCTGGGATCGGC GCTGCGCTGGATGCGCAGTACCGCTGCAGCCCTGCGGCGACCACTCGTCATCGCGGCGATTCTCTTCGTGATCGGTATCG TGGCGATCGTCGCCTTCCCGCTACGTCAGGGCTTTGCCAATCGCCAGGCGTGGACATACGTGGCAGCCGCCTTCCTCTAC CTCATGTCCACCGCGGCAGCCGCCCCCGCTCTCTCCACTGCCCTGCGCGTGGCACGGAGCCATTGGCGTCGACCAGTCAA TCGTGCCTCGGAAATCTGGGCGGTCACGCTGGTCATCCCCTTCCTGCTCTACCTCTTGCTCCTGCCTACCTTTCCTGGCA CCGAAGACCGCTTGTCGGTCTGGTTCGGCTGGCCGCTCTCACCCTGGCTTTGGGGTGCGATTCTCCTGCTGACCCTGACG GGGGCCGGCTACCTTTTCGCCTGGTTCAGTAGCTTGCCGGATCTCGCGATCGTCCGGGATCACGGTGAACCAGCGCAGCG CGGCTTAGCGGCTTGGCTGAGCCGTGGTTGGGTCGGCTCCCATCGTCAGTGGCGCATCTACGAGAAGGTCGTGAACAACA TCGGTGTCCTCTACGTCCTCATCTATGTCCCGGTGATGACCGTCCTGGCCTCGGACTTCATCATCGCGCTCATCCCCGGT TATTTCACGGCTGTGTTTCCCGCCTATTTCACGATCACCTCGTTCCAGGCGGGGATCGCGCTGACGATCGTGACCATGGC TGTCCTCCGCCGCTGGGGCGGGCAGGCTGATTACCTCGGCCGCGAGCAGTTCTGGGCCCTCGGCAAGATGCTCCTTGCCT TCTCCTTGCTTTGGTTCTACTTCTGGTGGTCGGAATTCATCATCTTCTGGTATGGACGCACGCCCCGTGAAATCGACATA CTCCGGTTCCTGATGTTCGAGACCTATCTATGGCCCTTCATTCTCTCCTTCGCGATGAATTTCGCCCTGCCACTCCTCAT CTTGATGTGGAACCCCATTCGCCGCAGCATCGCGGGACCGACTGTCGTTGCCGCGATTGTTCTCCTCGGGAATCTGATCG ATCGCATTCGCCTCGCATCGGCAGCCTTCTCCCAACCGGACAAGGCGCTCCTCGGGCATGCCCATGCTCTCAAGGCGATT CCGCCCGCCTATATCCCAGGGATCGGCGACATGCTGATCCTCATCGGCATGCTTGCTGGAGCGCTCGCGCTCGTGCTTTG GACGGCACGCTATCTGCCCTTCCCGTCGGTCGCCGAAGTCGTCGGCGGGCTGTGGCTGCGTGCCCATCAGCCGTTCAAGC ACGCGCGGCTCATCGTGATCGGAAAGACGGAATGA
Upstream 100 bases:
>100_bases GTACCGATCCGAAGGTCTATTACCTGAAGAAGATCGATCTCGAAGCTGCTGAGCACGCAGCAACGCACTGAGCGCTGATG AGCGAACGGGGTGAGGGGAT
Downstream 100 bases:
>100_bases GACTGATCAGTCGATCGGACACGAAAGCGAGGCTGGGGGAGAGCGATGCAAGAACGACATCGGCTCGGTGAAGAGGAAAT CACGCGGGAACTCCTGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Molybdopterin Oxidoredutase Membrane Subunit; Molybdopterin Oxidoreductase; Molybdopterin Oxidoreductase Membrane Subunit; NrfD Family Oxidoreductase Membrane Subunit; Polysulphide Reductase NrfD Superfamily; Oxidoredutase Membrane Subunit Nrfd Family
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MATHGHAHGHELQRTWELAPADVLGSALRWMRSTAAALRRPLVIAAILFVIGIVAIVAFPLRQGFANRQAWTYVAAAFLY LMSTAAAAPALSTALRVARSHWRRPVNRASEIWAVTLVIPFLLYLLLLPTFPGTEDRLSVWFGWPLSPWLWGAILLLTLT GAGYLFAWFSSLPDLAIVRDHGEPAQRGLAAWLSRGWVGSHRQWRIYEKVVNNIGVLYVLIYVPVMTVLASDFIIALIPG YFTAVFPAYFTITSFQAGIALTIVTMAVLRRWGGQADYLGREQFWALGKMLLAFSLLWFYFWWSEFIIFWYGRTPREIDI LRFLMFETYLWPFILSFAMNFALPLLILMWNPIRRSIAGPTVVAAIVLLGNLIDRIRLASAAFSQPDKALLGHAHALKAI PPAYIPGIGDMLILIGMLAGALALVLWTARYLPFPSVAEVVGGLWLRAHQPFKHARLIVIGKTE
Sequences:
>Translated_464_residues MATHGHAHGHELQRTWELAPADVLGSALRWMRSTAAALRRPLVIAAILFVIGIVAIVAFPLRQGFANRQAWTYVAAAFLY LMSTAAAAPALSTALRVARSHWRRPVNRASEIWAVTLVIPFLLYLLLLPTFPGTEDRLSVWFGWPLSPWLWGAILLLTLT GAGYLFAWFSSLPDLAIVRDHGEPAQRGLAAWLSRGWVGSHRQWRIYEKVVNNIGVLYVLIYVPVMTVLASDFIIALIPG YFTAVFPAYFTITSFQAGIALTIVTMAVLRRWGGQADYLGREQFWALGKMLLAFSLLWFYFWWSEFIIFWYGRTPREIDI LRFLMFETYLWPFILSFAMNFALPLLILMWNPIRRSIAGPTVVAAIVLLGNLIDRIRLASAAFSQPDKALLGHAHALKAI PPAYIPGIGDMLILIGMLAGALALVLWTARYLPFPSVAEVVGGLWLRAHQPFKHARLIVIGKTE >Mature_463_residues ATHGHAHGHELQRTWELAPADVLGSALRWMRSTAAALRRPLVIAAILFVIGIVAIVAFPLRQGFANRQAWTYVAAAFLYL MSTAAAAPALSTALRVARSHWRRPVNRASEIWAVTLVIPFLLYLLLLPTFPGTEDRLSVWFGWPLSPWLWGAILLLTLTG AGYLFAWFSSLPDLAIVRDHGEPAQRGLAAWLSRGWVGSHRQWRIYEKVVNNIGVLYVLIYVPVMTVLASDFIIALIPGY FTAVFPAYFTITSFQAGIALTIVTMAVLRRWGGQADYLGREQFWALGKMLLAFSLLWFYFWWSEFIIFWYGRTPREIDIL RFLMFETYLWPFILSFAMNFALPLLILMWNPIRRSIAGPTVVAAIVLLGNLIDRIRLASAAFSQPDKALLGHAHALKAIP PAYIPGIGDMLILIGMLAGALALVLWTARYLPFPSVAEVVGGLWLRAHQPFKHARLIVIGKTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52033; Mature: 51902
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATHGHAHGHELQRTWELAPADVLGSALRWMRSTAAALRRPLVIAAILFVIGIVAIVAFP CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQGFANRQAWTYVAAAFLYLMSTAAAAPALSTALRVARSHWRRPVNRASEIWAVTLVIP HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH FLLYLLLLPTFPGTEDRLSVWFGWPLSPWLWGAILLLTLTGAGYLFAWFSSLPDLAIVRD HHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEC HGEPAQRGLAAWLSRGWVGSHRQWRIYEKVVNNIGVLYVLIYVPVMTVLASDFIIALIPG CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFTAVFPAYFTITSFQAGIALTIVTMAVLRRWGGQADYLGREQFWALGKMLLAFSLLWFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH FWWSEFIIFWYGRTPREIDILRFLMFETYLWPFILSFAMNFALPLLILMWNPIRRSIAGP HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH TVVAAIVLLGNLIDRIRLASAAFSQPDKALLGHAHALKAIPPAYIPGIGDMLILIGMLAG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHH ALALVLWTARYLPFPSVAEVVGGLWLRAHQPFKHARLIVIGKTE HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCC >Mature Secondary Structure ATHGHAHGHELQRTWELAPADVLGSALRWMRSTAAALRRPLVIAAILFVIGIVAIVAFP CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQGFANRQAWTYVAAAFLYLMSTAAAAPALSTALRVARSHWRRPVNRASEIWAVTLVIP HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH FLLYLLLLPTFPGTEDRLSVWFGWPLSPWLWGAILLLTLTGAGYLFAWFSSLPDLAIVRD HHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEC HGEPAQRGLAAWLSRGWVGSHRQWRIYEKVVNNIGVLYVLIYVPVMTVLASDFIIALIPG CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFTAVFPAYFTITSFQAGIALTIVTMAVLRRWGGQADYLGREQFWALGKMLLAFSLLWFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH FWWSEFIIFWYGRTPREIDILRFLMFETYLWPFILSFAMNFALPLLILMWNPIRRSIAGP HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH TVVAAIVLLGNLIDRIRLASAAFSQPDKALLGHAHALKAIPPAYIPGIGDMLILIGMLAG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHH ALALVLWTARYLPFPSVAEVVGGLWLRAHQPFKHARLIVIGKTE HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA