Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632358

Identifier: 221632358

GI number: 221632358

Start: 332689

End: 333156

Strand: Reverse

Name: 221632358

Synonym: trd_0329

Alternate gene names: NA

Gene position: 333156-332689 (Counterclockwise)

Preceding gene: 221632359

Following gene: 221632356

Centisome position: 16.63

GC content: 61.32

Gene sequence:

>468_bases
ATGCGTAATCCGTTCGACTGGGACTACCTGACCGCTCCGCTCTGGCAAATGCCTACTTGGGGACCGCTCTCGATCACGTA
CGTCGTCGTTTTCTCGCTCGGTTTCCTCACCTGTCTCTGGATCTACAACGACCCACGCCGACTCATCCGCAAGCGCGATC
CTCTCCTGGCCGACTTCCTGCAGCGCATCGCTGGATGGGGTCTCATCGTCTTCGGCATAGGACTCTTCTTCTTTCTCTTC
CGGCTCGGCCGCATCAGTGCCTTCGATCTCTACAAGCGGATCTGGCTGTATCTCAGCGCCCTCTTGGTACTCGTGTGGAC
AGCGTATGCCGCGCACCTGCTGCTTCGCGTCTATCCACCCCTCGCGCGGCAGCGCGCCGAAGAGCTCCGGCGCAAGCAGT
ACGCGATGACCCCCAAGCGAGCAGCTCGCCGTGCAACCTCGGCAGCATCTCCACGCAAGCCTCGCTGA

Upstream 100 bases:

>100_bases
CAATTGCACGGAAGCATGCCCGCGTGGTATCCAGGTCACCAACGCGATCGAGCAGGTCAAGCGCCGTATCCTCTTCGAGC
AAAGCTAGCGGGAGCCAGCG

Downstream 100 bases:

>100_bases
AACGCCCTCGCTCGATCTGCTTTCTGGAAACGACGCGGGCCACAGCGGCCATGACCGCTGTGGCCCGATGAACGGACCGT
GCACCCTCCGTCGATCGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MRNPFDWDYLTAPLWQMPTWGPLSITYVVVFSLGFLTCLWIYNDPRRLIRKRDPLLADFLQRIAGWGLIVFGIGLFFFLF
RLGRISAFDLYKRIWLYLSALLVLVWTAYAAHLLLRVYPPLARQRAEELRRKQYAMTPKRAARRATSAASPRKPR

Sequences:

>Translated_155_residues
MRNPFDWDYLTAPLWQMPTWGPLSITYVVVFSLGFLTCLWIYNDPRRLIRKRDPLLADFLQRIAGWGLIVFGIGLFFFLF
RLGRISAFDLYKRIWLYLSALLVLVWTAYAAHLLLRVYPPLARQRAEELRRKQYAMTPKRAARRATSAASPRKPR
>Mature_155_residues
MRNPFDWDYLTAPLWQMPTWGPLSITYVVVFSLGFLTCLWIYNDPRRLIRKRDPLLADFLQRIAGWGLIVFGIGLFFFLF
RLGRISAFDLYKRIWLYLSALLVLVWTAYAAHLLLRVYPPLARQRAEELRRKQYAMTPKRAARRATSAASPRKPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18294; Mature: 18294

Theoretical pI: Translated: 11.57; Mature: 11.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNPFDWDYLTAPLWQMPTWGPLSITYVVVFSLGFLTCLWIYNDPRRLIRKRDPLLADFL
CCCCCCCHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHH
QRIAGWGLIVFGIGLFFFLFRLGRISAFDLYKRIWLYLSALLVLVWTAYAAHLLLRVYPP
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
LARQRAEELRRKQYAMTPKRAARRATSAASPRKPR
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRNPFDWDYLTAPLWQMPTWGPLSITYVVVFSLGFLTCLWIYNDPRRLIRKRDPLLADFL
CCCCCCCHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHH
QRIAGWGLIVFGIGLFFFLFRLGRISAFDLYKRIWLYLSALLVLVWTAYAAHLLLRVYPP
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
LARQRAEELRRKQYAMTPKRAARRATSAASPRKPR
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA