Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632356

Identifier: 221632356

GI number: 221632356

Start: 329757

End: 330116

Strand: Reverse

Name: 221632356

Synonym: trd_0327

Alternate gene names: NA

Gene position: 330116-329757 (Counterclockwise)

Preceding gene: 221632358

Following gene: 221632355

Centisome position: 16.48

GC content: 63.33

Gene sequence:

>360_bases
GTGATTTCCCTCTGCCATCCGATTCGGCGATACCCGGTCGCCTTCTGGCAGGTGACTTGGCTCGCTCGCATCGAGGCCGC
CCGGGCTGCCCAACTCTTGCGTGATCACTATCCCGCAGTGTTCGGACGAGCTCGTTTGCGCCGACTCGGTTACCCCGGTA
TCCGGCAGACGCGGACCATCGTCGGCGAGTACATGCTCACGGTCGAGGACGTGCTCGCCGGTCGCCGGTTTCCTGACGCC
ATCGCGCGAGTCGCGTGGCCGATCGAACTCCTGACTCAACGGCGAGCTACCATTGGCAGCCATTCCCGGACGGTCACTTT
CACACCATCCCCTATCGCTCCTTGCTCTCACCCGAGTTGA

Upstream 100 bases:

>100_bases
CGCTGTCGCGTGTAGTCGGATATCGTTCCTGATATTCTGTCTGTTCACGTGCACCTCGTGCAGATCAGTCGCGATCAGTC
TCTCGGTACACCAGTTCCCG

Downstream 100 bases:

>100_bases
CCAACCTCCTCGCCATCGGTCGCTGCACCGATGCCGAACCAGCAGCGCTTTCCAGCGCTCGTGTGATGGGGCCATGCATC
GCCATGGGGGTGGCCGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MISLCHPIRRYPVAFWQVTWLARIEAARAAQLLRDHYPAVFGRARLRRLGYPGIRQTRTIVGEYMLTVEDVLAGRRFPDA
IARVAWPIELLTQRRATIGSHSRTVTFTPSPIAPCSHPS

Sequences:

>Translated_119_residues
MISLCHPIRRYPVAFWQVTWLARIEAARAAQLLRDHYPAVFGRARLRRLGYPGIRQTRTIVGEYMLTVEDVLAGRRFPDA
IARVAWPIELLTQRRATIGSHSRTVTFTPSPIAPCSHPS
>Mature_119_residues
MISLCHPIRRYPVAFWQVTWLARIEAARAAQLLRDHYPAVFGRARLRRLGYPGIRQTRTIVGEYMLTVEDVLAGRRFPDA
IARVAWPIELLTQRRATIGSHSRTVTFTPSPIAPCSHPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13549; Mature: 13549

Theoretical pI: Translated: 11.84; Mature: 11.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLCHPIRRYPVAFWQVTWLARIEAARAAQLLRDHYPAVFGRARLRRLGYPGIRQTRTI
CCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VGEYMLTVEDVLAGRRFPDAIARVAWPIELLTQRRATIGSHSRTVTFTPSPIAPCSHPS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MISLCHPIRRYPVAFWQVTWLARIEAARAAQLLRDHYPAVFGRARLRRLGYPGIRQTRTI
CCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VGEYMLTVEDVLAGRRFPDAIARVAWPIELLTQRRATIGSHSRTVTFTPSPIAPCSHPS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA