Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

Click here to switch to the map view.

The map label for this gene is 221632355

Identifier: 221632355

GI number: 221632355

Start: 329563

End: 329775

Strand: Reverse

Name: 221632355

Synonym: trd_0326

Alternate gene names: NA

Gene position: 329775-329563 (Counterclockwise)

Preceding gene: 221632356

Following gene: 221632354

Centisome position: 16.46

GC content: 62.91

Gene sequence:

>213_bases
TTGCTCTCACCCGAGTTGACCAACCTCCTCGCCATCGGTCGCTGCACCGATGCCGAACCAGCAGCGCTTTCCAGCGCTCG
TGTGATGGGGCCATGCATCGCCATGGGGGTGGCCGCAGCGCACGCAGCTGATCTCGCCTCCATCGCCCAGTTCTCCTTCC
GCAACACCGATCTCCCTCACCTGCAGGAGCGATTGCAACCCAATCTCTCCTGA

Upstream 100 bases:

>100_bases
TCGCGCGAGTCGCGTGGCCGATCGAACTCCTGACTCAACGGCGAGCTACCATTGGCAGCCATTCCCGGACGGTCACTTTC
ACACCATCCCCTATCGCTCC

Downstream 100 bases:

>100_bases
ACTCGCTTTCCGACTGACTCTATCCGTCGCTCGATGCCGTCATGCTCCGATCCGACCTCGCTCGAAAGCTGTTCGGAGAG
ACCGGGTTCTTCATTCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MLSPELTNLLAIGRCTDAEPAALSSARVMGPCIAMGVAAAHAADLASIAQFSFRNTDLPHLQERLQPNLS

Sequences:

>Translated_70_residues
MLSPELTNLLAIGRCTDAEPAALSSARVMGPCIAMGVAAAHAADLASIAQFSFRNTDLPHLQERLQPNLS
>Mature_70_residues
MLSPELTNLLAIGRCTDAEPAALSSARVMGPCIAMGVAAAHAADLASIAQFSFRNTDLPHLQERLQPNLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7347; Mature: 7347

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSPELTNLLAIGRCTDAEPAALSSARVMGPCIAMGVAAAHAADLASIAQFSFRNTDLPH
CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LQERLQPNLS
HHHHCCCCCC
>Mature Secondary Structure
MLSPELTNLLAIGRCTDAEPAALSSARVMGPCIAMGVAAAHAADLASIAQFSFRNTDLPH
CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LQERLQPNLS
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA