| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is pheB [H]
Identifier: 221632351
GI number: 221632351
Start: 326592
End: 327587
Strand: Reverse
Name: pheB [H]
Synonym: trd_0322
Alternate gene names: 221632351
Gene position: 327587-326592 (Counterclockwise)
Preceding gene: 221632352
Following gene: 221632350
Centisome position: 16.35
GC content: 66.37
Gene sequence:
>996_bases ATGAGCACGAACGGGCATGCGGAACCACTCTTCGAGGTCGCGCAACTGGCGCACGTCGAGATCTATACCCCGGACCTCGA CGGCACGCTCTGGTTCTTCAAGGAGCTCCTCGGCCTGGAGGAGACCGAGCGGGTCGGCGACTCGGTCTATCTGCGTGCCT ATGAGGACTGGTACCACCACACCCTCAAGGTCACCAAGCGCGAAAAGCCGGGCCTTGGGCACGTGGCCTGGCGCACCACC TCCCCCCAGGCGCTCGAGCGCCGCGTCCGCGCCCTCGAGGAAGCCGGCTTCGGCGAGGGGTGGATCGAGGGAGACCGCGG CCATGGCCGCGCCTACCGCTTCCACACCCCCGACGGGCACCCGATGGAGCTCCTCTGGGAGGTCGAGTACTACAAGACCC CGGCCGAGGCCAAGACCAAGCTCATCAACAGGCCGCAGCGCCGCCCCCTGCGCGGCGTCCCGGTCCGCCGCATCGATCAC GTCAATCTCCTGGCCAGCGACGTGACCCAGAACAAGCAGTTCCTGATGGACCTCCTCGGCTTCCGCTTGCGCGAGAACAT CCAGCTCAATAACGGCCGGGAGGCCGGCGCCTGGCTCTCGGTCAGCCCGCTGGTGCACGAGATCGCCTTCATGATGGACC AGTCCGGCGCCAAGGGCCGGCTCCACCACGTCTGCTACTGGTACGGCTACCCGCAGCACCTCAACGACATCGCGGATGTG TTCAGCGAGGTCGGGATCAAGATCGAAGCTGGCCCCGGCAAGCACGGGATCTCCCAAGCCATGTTCATGTACGTCATCGA GCCGGGCGGCAACCGCGTCGAACTCTTCGGGGATGCCGGGTACTTGATCTTCGACCCAGCCTGGCAGCCGATCACCTGGC GGGAGGAGGAGCTCGACAAGGGAATCATCTGGTTTGGCTCCCCACTGCCGGCCGAGTTCTTCCTCTACGGCACCCCGCCG GTCGAGGCTGCCGAACCTGCCCGCGCCGACGACTGA
Upstream 100 bases:
>100_bases CGGCCGCCGGGAAGGAGGGTATGGCCGCACGATGGGATCGGCACCCGCGCCAGTCGCGAGGTAGGTCGTCTTCTGACGTG GCACGATGGGAGGGAGTCCC
Downstream 100 bases:
>100_bases CCCGCCAGTGAAACGAGAACTGGCCACCCGTCCCGCTCATCGAGCGGGACGGGTGGCCTCAGCATGACCACTGGTTCACG ACCATACCCTAGCATGGTAC
Product: catechol 2,3-dioxygenase
Products: NA
Alternate protein names: MPC; CatO2ase; Catechol 2,3-dioxygenase [H]
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MSTNGHAEPLFEVAQLAHVEIYTPDLDGTLWFFKELLGLEETERVGDSVYLRAYEDWYHHTLKVTKREKPGLGHVAWRTT SPQALERRVRALEEAGFGEGWIEGDRGHGRAYRFHTPDGHPMELLWEVEYYKTPAEAKTKLINRPQRRPLRGVPVRRIDH VNLLASDVTQNKQFLMDLLGFRLRENIQLNNGREAGAWLSVSPLVHEIAFMMDQSGAKGRLHHVCYWYGYPQHLNDIADV FSEVGIKIEAGPGKHGISQAMFMYVIEPGGNRVELFGDAGYLIFDPAWQPITWREEELDKGIIWFGSPLPAEFFLYGTPP VEAAEPARADD
Sequences:
>Translated_331_residues MSTNGHAEPLFEVAQLAHVEIYTPDLDGTLWFFKELLGLEETERVGDSVYLRAYEDWYHHTLKVTKREKPGLGHVAWRTT SPQALERRVRALEEAGFGEGWIEGDRGHGRAYRFHTPDGHPMELLWEVEYYKTPAEAKTKLINRPQRRPLRGVPVRRIDH VNLLASDVTQNKQFLMDLLGFRLRENIQLNNGREAGAWLSVSPLVHEIAFMMDQSGAKGRLHHVCYWYGYPQHLNDIADV FSEVGIKIEAGPGKHGISQAMFMYVIEPGGNRVELFGDAGYLIFDPAWQPITWREEELDKGIIWFGSPLPAEFFLYGTPP VEAAEPARADD >Mature_330_residues STNGHAEPLFEVAQLAHVEIYTPDLDGTLWFFKELLGLEETERVGDSVYLRAYEDWYHHTLKVTKREKPGLGHVAWRTTS PQALERRVRALEEAGFGEGWIEGDRGHGRAYRFHTPDGHPMELLWEVEYYKTPAEAKTKLINRPQRRPLRGVPVRRIDHV NLLASDVTQNKQFLMDLLGFRLRENIQLNNGREAGAWLSVSPLVHEIAFMMDQSGAKGRLHHVCYWYGYPQHLNDIADVF SEVGIKIEAGPGKHGISQAMFMYVIEPGGNRVELFGDAGYLIFDPAWQPITWREEELDKGIIWFGSPLPAEFFLYGTPPV EAAEPARADD
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017624 - InterPro: IPR004360 - InterPro: IPR000486 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =1.13.11.2 [H]
Molecular weight: Translated: 37792; Mature: 37661
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS00082 EXTRADIOL_DIOXYGENAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNGHAEPLFEVAQLAHVEIYTPDLDGTLWFFKELLGLEETERVGDSVYLRAYEDWYHH CCCCCCCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCHHHHCCCEEEEEEHHHHHHH TLKVTKREKPGLGHVAWRTTSPQALERRVRALEEAGFGEGWIEGDRGHGRAYRFHTPDGH HEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEECCCCC PMELLWEVEYYKTPAEAKTKLINRPQRRPLRGVPVRRIDHVNLLASDVTQNKQFLMDLLG CEEEEEEEHHHCCCHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHHHHCHHHHHHHHHH FRLRENIQLNNGREAGAWLSVSPLVHEIAFMMDQSGAKGRLHHVCYWYGYPQHLNDIADV HHHHCCEEECCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHH FSEVGIKIEAGPGKHGISQAMFMYVIEPGGNRVELFGDAGYLIFDPAWQPITWREEELDK HHHCCEEEECCCCCCCHHCEEEEEEECCCCCEEEEEECCCEEEECCCCCCCCCCHHHHCC GIIWFGSPLPAEFFLYGTPPVEAAEPARADD CEEEECCCCCCEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure STNGHAEPLFEVAQLAHVEIYTPDLDGTLWFFKELLGLEETERVGDSVYLRAYEDWYHH CCCCCCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCHHHHCCCEEEEEEHHHHHHH TLKVTKREKPGLGHVAWRTTSPQALERRVRALEEAGFGEGWIEGDRGHGRAYRFHTPDGH HEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEECCCCC PMELLWEVEYYKTPAEAKTKLINRPQRRPLRGVPVRRIDHVNLLASDVTQNKQFLMDLLG CEEEEEEEHHHCCCHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHHHHCHHHHHHHHHH FRLRENIQLNNGREAGAWLSVSPLVHEIAFMMDQSGAKGRLHHVCYWYGYPQHLNDIADV HHHHCCEEECCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHH FSEVGIKIEAGPGKHGISQAMFMYVIEPGGNRVELFGDAGYLIFDPAWQPITWREEELDK HHHCCEEEECCCCCCCHHCEEEEEEECCCCCEEEEEECCCEEEECCCCCCCCCCHHHHCC GIIWFGSPLPAEFFLYGTPPVEAAEPARADD CEEEECCCCCCEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA