Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632340

Identifier: 221632340

GI number: 221632340

Start: 316419

End: 316862

Strand: Reverse

Name: 221632340

Synonym: trd_0310

Alternate gene names: NA

Gene position: 316862-316419 (Counterclockwise)

Preceding gene: 221632341

Following gene: 221632338

Centisome position: 15.82

GC content: 66.44

Gene sequence:

>444_bases
TTGCGAGCAGTGGCCCGTCAGCAGGACAGTCCGCTGCGGTGCATGGTCGAGACGACCGGTGGAACGATCGTCAGCGAAGC
TCACCCCGGCGTCGGCGGGCCAGGCACCGCCAGTTGCTCCGGTGACCTGCTCCTGGCCGCCTTAGCCGCGTGCGCGCAGA
TCACTTGCCAGATGGTCGCGACCGCGCTCGGCATCCCGCTCACGCGAGTGAGCGCGACAGCCGAGGGTGACCTGGACCTC
CGCGGGACGCTCGGCGTGTCACGTGAGGTCCCGGTCGGGTTCGGAGCGATCCGCCTCTTCATCGATATCGAGGCACCGGA
CGCGACACCCGAGCAACTGGCGAGCCTTCGCGAGAAAACGGAGCAATTCTGTGTCATCTTCCATACGCTCCGTCAGCCGC
CAGAACTCAGCGTGCAGTGGTCCTCCAGTAACGCTCAGCCGTAG

Upstream 100 bases:

>100_bases
GCCAGTGCAGCGAAAGGAAGAGAACATGCTGGATCTGCGCGCTCTGCAACGACCGCTCAAGCAGCGCTAACGCGAACGGC
CCGAGGAGGCGCTCATCACC

Downstream 100 bases:

>100_bases
AGCTCAGCCAGCCGATCGATCGTGAAACCGGGGGCCTGACATGCCTCGATGATGCGCCGTTCGCGGGCTTCCACTTCTTT
GGCTGCTCGGTAGAGTTCCG

Product: OsmC-like protein

Products: NA

Alternate protein names: OsmC-Like Protein; Osmc Family Protein

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MRAVARQQDSPLRCMVETTGGTIVSEAHPGVGGPGTASCSGDLLLAALAACAQITCQMVATALGIPLTRVSATAEGDLDL
RGTLGVSREVPVGFGAIRLFIDIEAPDATPEQLASLREKTEQFCVIFHTLRQPPELSVQWSSSNAQP

Sequences:

>Translated_147_residues
MRAVARQQDSPLRCMVETTGGTIVSEAHPGVGGPGTASCSGDLLLAALAACAQITCQMVATALGIPLTRVSATAEGDLDL
RGTLGVSREVPVGFGAIRLFIDIEAPDATPEQLASLREKTEQFCVIFHTLRQPPELSVQWSSSNAQP
>Mature_147_residues
MRAVARQQDSPLRCMVETTGGTIVSEAHPGVGGPGTASCSGDLLLAALAACAQITCQMVATALGIPLTRVSATAEGDLDL
RGTLGVSREVPVGFGAIRLFIDIEAPDATPEQLASLREKTEQFCVIFHTLRQPPELSVQWSSSNAQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15374; Mature: 15374

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVARQQDSPLRCMVETTGGTIVSEAHPGVGGPGTASCSGDLLLAALAACAQITCQMVA
CCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TALGIPLTRVSATAEGDLDLRGTLGVSREVPVGFGAIRLFIDIEAPDATPEQLASLREKT
HHHCCCCEEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHH
EQFCVIFHTLRQPPELSVQWSSSNAQP
HHHHHHHHHHCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MRAVARQQDSPLRCMVETTGGTIVSEAHPGVGGPGTASCSGDLLLAALAACAQITCQMVA
CCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TALGIPLTRVSATAEGDLDLRGTLGVSREVPVGFGAIRLFIDIEAPDATPEQLASLREKT
HHHCCCCEEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHH
EQFCVIFHTLRQPPELSVQWSSSNAQP
HHHHHHHHHHCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA