Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632329

Identifier: 221632329

GI number: 221632329

Start: 303248

End: 304294

Strand: Reverse

Name: 221632329

Synonym: trd_0299

Alternate gene names: NA

Gene position: 304294-303248 (Counterclockwise)

Preceding gene: 221632330

Following gene: 221632328

Centisome position: 15.19

GC content: 61.8

Gene sequence:

>1047_bases
ATGAGCGTGCATCAGATGGCTGAGCCGACTCTCGAGGCCGTACGGCACGCCCGGGAGGCGATAGAGTACTGCTACGAACG
CGGTTGGACCGATGGACTACCTGTCGTGCCACCGGCAGAGGAGTTCGTCGCCGAGTTCCTCGCCCAGACCGACCGTGATC
CCGAAGAGGTCGTGATCGAGCAAGAGCATCTCGGTCGCAAGTGCACGGTACGTCTCGCTGCCGCAAATGCGGTCATGGCT
GGCTGTAAACCGGACTATTTCCCTGTCGTTCTCGCGGCCCTGGAAGCCCTCGATCGAGTGCCCGGTAGTCGCGGCCTCTT
GCAGAGCACGACTGGCCAAGCGGTTTTTGTCGTCGTCAATGGACCGATCCGACATCGCCTCGGTTTCAACGCCAGGGACA
ACGTCTTCAGCCCGGGAGACCGTCCGAACGCGACGATCGGGCGGGCGATCCGACTCGTGATCATGAATGCGCTCGGCATC
CGTCCACACGAGTTCGATCAAAGCACCCACGGCCAACCCGGTAAGTTCAGTCTCTGCATCGCGGAGAACGAAGAAGAGAG
TCCGTGGGAGCCACTGCACGTCGAGCGAGGTTTTGCGCAAGACGAAAGCACGGTAACGGTCGGCCTCGTGCGGGGCACGA
TTCAGGTCGAGCAACGCGACTCCCAGCACCCCGAGGTGATCCTGGAAACGATCGCCGATTCGATGTCGTACGCGGGAACG
TATTTCCCGACGCCGCGCGGGCACGCTGGTATCGTCGTGATGGGGCCAGAGCACGCCCAACTCATCGCTGCCGCCGGCTG
GAGCAAAACCCGGGCACGACAATACCTGTGGGAGCACTTCGGTCGCCCAGCAGGAGTTTTGCGACGGTTGGCGAAGGACG
CTTTGCTGGATGCCTCTCTGCCGGACGATGCCTTCGTGCGCTTCGCTCATTCACCGGAAACCATCCTGATCGTCGTCGCC
GGAGCTCGCAACGCTGGTATCTCGACCGTCTGCCCGACCTTCATCGGCCAGCAGATCACCATACCGATCCGCACCAAATC
ATCTTGA

Upstream 100 bases:

>100_bases
AGCAGCCTCAGCCCGGAGGAAGTCCGACAACGGGCTGAACAAGTAGTTCCTGAACTGCTTCGGCTGCTGGGAGTCGAGGA
CGCTGCCGCGGAGGGACGAC

Downstream 100 bases:

>100_bases
GGCGAGCGGCGAACGGAACGTCAGCGAGGAATGGTTCCATCGTGAAGAGCGGAAACCGCTCTGCTCAGCACAGGTGCATG
AGCCATGACCAAAGTCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MSVHQMAEPTLEAVRHAREAIEYCYERGWTDGLPVVPPAEEFVAEFLAQTDRDPEEVVIEQEHLGRKCTVRLAAANAVMA
GCKPDYFPVVLAALEALDRVPGSRGLLQSTTGQAVFVVVNGPIRHRLGFNARDNVFSPGDRPNATIGRAIRLVIMNALGI
RPHEFDQSTHGQPGKFSLCIAENEEESPWEPLHVERGFAQDESTVTVGLVRGTIQVEQRDSQHPEVILETIADSMSYAGT
YFPTPRGHAGIVVMGPEHAQLIAAAGWSKTRARQYLWEHFGRPAGVLRRLAKDALLDASLPDDAFVRFAHSPETILIVVA
GARNAGISTVCPTFIGQQITIPIRTKSS

Sequences:

>Translated_348_residues
MSVHQMAEPTLEAVRHAREAIEYCYERGWTDGLPVVPPAEEFVAEFLAQTDRDPEEVVIEQEHLGRKCTVRLAAANAVMA
GCKPDYFPVVLAALEALDRVPGSRGLLQSTTGQAVFVVVNGPIRHRLGFNARDNVFSPGDRPNATIGRAIRLVIMNALGI
RPHEFDQSTHGQPGKFSLCIAENEEESPWEPLHVERGFAQDESTVTVGLVRGTIQVEQRDSQHPEVILETIADSMSYAGT
YFPTPRGHAGIVVMGPEHAQLIAAAGWSKTRARQYLWEHFGRPAGVLRRLAKDALLDASLPDDAFVRFAHSPETILIVVA
GARNAGISTVCPTFIGQQITIPIRTKSS
>Mature_347_residues
SVHQMAEPTLEAVRHAREAIEYCYERGWTDGLPVVPPAEEFVAEFLAQTDRDPEEVVIEQEHLGRKCTVRLAAANAVMAG
CKPDYFPVVLAALEALDRVPGSRGLLQSTTGQAVFVVVNGPIRHRLGFNARDNVFSPGDRPNATIGRAIRLVIMNALGIR
PHEFDQSTHGQPGKFSLCIAENEEESPWEPLHVERGFAQDESTVTVGLVRGTIQVEQRDSQHPEVILETIADSMSYAGTY
FPTPRGHAGIVVMGPEHAQLIAAAGWSKTRARQYLWEHFGRPAGVLRRLAKDALLDASLPDDAFVRFAHSPETILIVVAG
ARNAGISTVCPTFIGQQITIPIRTKSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38096; Mature: 37964

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVHQMAEPTLEAVRHAREAIEYCYERGWTDGLPVVPPAEEFVAEFLAQTDRDPEEVVIE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHEEEE
QEHLGRKCTVRLAAANAVMAGCKPDYFPVVLAALEALDRVPGSRGLLQSTTGQAVFVVVN
HHHCCCEEEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEEC
GPIRHRLGFNARDNVFSPGDRPNATIGRAIRLVIMNALGIRPHEFDQSTHGQPGKFSLCI
CCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE
AENEEESPWEPLHVERGFAQDESTVTVGLVRGTIQVEQRDSQHPEVILETIADSMSYAGT
ECCCCCCCCCCEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCC
YFPTPRGHAGIVVMGPEHAQLIAAAGWSKTRARQYLWEHFGRPAGVLRRLAKDALLDASL
CCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
PDDAFVRFAHSPETILIVVAGARNAGISTVCPTFIGQQITIPIRTKSS
CHHHHEEEECCCCEEEEEEECCCCCCCHHHHHHHCCCEEEEEEEECCC
>Mature Secondary Structure 
SVHQMAEPTLEAVRHAREAIEYCYERGWTDGLPVVPPAEEFVAEFLAQTDRDPEEVVIE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHEEEE
QEHLGRKCTVRLAAANAVMAGCKPDYFPVVLAALEALDRVPGSRGLLQSTTGQAVFVVVN
HHHCCCEEEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEEC
GPIRHRLGFNARDNVFSPGDRPNATIGRAIRLVIMNALGIRPHEFDQSTHGQPGKFSLCI
CCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE
AENEEESPWEPLHVERGFAQDESTVTVGLVRGTIQVEQRDSQHPEVILETIADSMSYAGT
ECCCCCCCCCCEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCC
YFPTPRGHAGIVVMGPEHAQLIAAAGWSKTRARQYLWEHFGRPAGVLRRLAKDALLDASL
CCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
PDDAFVRFAHSPETILIVVAGARNAGISTVCPTFIGQQITIPIRTKSS
CHHHHEEEECCCCEEEEEEECCCCCCCHHHHHHHCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA