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The map label for this gene is ycbK [H]

Identifier: 221632315

GI number: 221632315

Start: 288172

End: 289101

Strand: Reverse

Name: ycbK [H]

Synonym: trd_0282

Alternate gene names: 221632315

Gene position: 289101-288172 (Counterclockwise)

Preceding gene: 221632317

Following gene: 221632314

Centisome position: 14.43

GC content: 65.91

Gene sequence:

>930_bases
GTGACCGCTGGTTGGCGTGCCCGTGTCGAGCGAAGATGGCTGGTTGGCATCGACCGGATCGGTGCTGGCGCCGTCGTGCT
CTCCGCTCTCGGTTTCGGTACGCTGGCCACCCTCACCAAGCTGGCCTACGGTGCGAGTGTTCCTGTCCCGACTCTGATCG
CCTGGCGATTCGGCATCGCTGCGCTGCTCGTGATCATGGCGCTTCCGCTCGAGCAGTGGCGTCGCGGGCAGCTCTTCGGG
CGCCAGCCGTGGACCGACCGTCGGCGCTTGGCCACGGCAGCGGCTGTCGCTTGTTTCGTCGGCAACACCATCTTGTACCT
CGTCGCACTGCAACGCGTCTCGGTCGCCACGGCAGCGATCCTGTTCTACGTCTATCCGCTGGTGGTCCTCGCTCTCCGGC
TCGTTGGTTGGCGAGAGGTGCCCACGCGGCGCCAGCTCGCCGCGCTCCTGGCTGGCTTCAGCGGCGTCACGCTCACACTC
GGCTGGCGCTGGCACACCATCGACCTGACCGGTTCGCTTCTCATGCTCGCTTCGGCATCACTCTATGCCGCTTACATCGT
CTTCGGCCACCGTGGTTTCCGCGACGCGTCACCGGTCTTGGCGACTGCCTGCACCTTTTCGGCAACAGCGGTCGTCGCGT
TGGCGCTCCTCTCCGTGGAGCGTGCTCCGCTCCTCATCGACCGTTCGGCACTGCTCCCAGTGCTCGGCATCGTGGTGCTC
GCCACCGTGCTCCCCGTTCAGCTTTTCCTGATCGGCACGCTCCGCTTGGGACCGACCCCAGCGGCGATTCTCGGCACGTT
GGAACCGGTCGCCTCGGTCTTCGTCGCGATGATGGTGCTCAGCGAGCAGCTGACGCTGGTACAGCTCGTTGGTGGGCTGC
TGGTGCTGACTGCGGCTGCGGTGATCAGTGGACAAGGAGGGAAACCGTGA

Upstream 100 bases:

>100_bases
GCGAGACAGCCGTACAGGACAACTGTCCAGACTCCCGACCGGAACCGTTCAGGTTGTGTCGAGGCGGAAGCTGGGAGACA
ATGACCCGTGGGGTGTCGCG

Downstream 100 bases:

>100_bases
CCGACTGTGGAATCGATTGGAATGCGCTTCAGGACGAAGTCACTCGCCACTTGCAAGCATTGATCCGCTTCGAGACGGTC
AATCCGCCCGGCAACGAGAC

Product: putative integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTAGWRARVERRWLVGIDRIGAGAVVLSALGFGTLATLTKLAYGASVPVPTLIAWRFGIAALLVIMALPLEQWRRGQLFG
RQPWTDRRRLATAAAVACFVGNTILYLVALQRVSVATAAILFYVYPLVVLALRLVGWREVPTRRQLAALLAGFSGVTLTL
GWRWHTIDLTGSLLMLASASLYAAYIVFGHRGFRDASPVLATACTFSATAVVALALLSVERAPLLIDRSALLPVLGIVVL
ATVLPVQLFLIGTLRLGPTPAAILGTLEPVASVFVAMMVLSEQLTLVQLVGGLLVLTAAAVISGQGGKP

Sequences:

>Translated_309_residues
MTAGWRARVERRWLVGIDRIGAGAVVLSALGFGTLATLTKLAYGASVPVPTLIAWRFGIAALLVIMALPLEQWRRGQLFG
RQPWTDRRRLATAAAVACFVGNTILYLVALQRVSVATAAILFYVYPLVVLALRLVGWREVPTRRQLAALLAGFSGVTLTL
GWRWHTIDLTGSLLMLASASLYAAYIVFGHRGFRDASPVLATACTFSATAVVALALLSVERAPLLIDRSALLPVLGIVVL
ATVLPVQLFLIGTLRLGPTPAAILGTLEPVASVFVAMMVLSEQLTLVQLVGGLLVLTAAAVISGQGGKP
>Mature_308_residues
TAGWRARVERRWLVGIDRIGAGAVVLSALGFGTLATLTKLAYGASVPVPTLIAWRFGIAALLVIMALPLEQWRRGQLFGR
QPWTDRRRLATAAAVACFVGNTILYLVALQRVSVATAAILFYVYPLVVLALRLVGWREVPTRRQLAALLAGFSGVTLTLG
WRWHTIDLTGSLLMLASASLYAAYIVFGHRGFRDASPVLATACTFSATAVVALALLSVERAPLLIDRSALLPVLGIVVLA
TVLPVQLFLIGTLRLGPTPAAILGTLEPVASVFVAMMVLSEQLTLVQLVGGLLVLTAAAVISGQGGKP

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32800; Mature: 32669

Theoretical pI: Translated: 11.73; Mature: 11.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAGWRARVERRWLVGIDRIGAGAVVLSALGFGTLATLTKLAYGASVPVPTLIAWRFGIA
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ALLVIMALPLEQWRRGQLFGRQPWTDRRRLATAAAVACFVGNTILYLVALQRVSVATAAI
HHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFYVYPLVVLALRLVGWREVPTRRQLAALLAGFSGVTLTLGWRWHTIDLTGSLLMLASAS
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEECCHHHHHHHHHH
LYAAYIVFGHRGFRDASPVLATACTFSATAVVALALLSVERAPLLIDRSALLPVLGIVVL
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHH
ATVLPVQLFLIGTLRLGPTPAAILGTLEPVASVFVAMMVLSEQLTLVQLVGGLLVLTAAA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VISGQGGKP
HHCCCCCCC
>Mature Secondary Structure 
TAGWRARVERRWLVGIDRIGAGAVVLSALGFGTLATLTKLAYGASVPVPTLIAWRFGIA
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ALLVIMALPLEQWRRGQLFGRQPWTDRRRLATAAAVACFVGNTILYLVALQRVSVATAAI
HHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFYVYPLVVLALRLVGWREVPTRRQLAALLAGFSGVTLTLGWRWHTIDLTGSLLMLASAS
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEECCHHHHHHHHHH
LYAAYIVFGHRGFRDASPVLATACTFSATAVVALALLSVERAPLLIDRSALLPVLGIVVL
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHH
ATVLPVQLFLIGTLRLGPTPAAILGTLEPVASVFVAMMVLSEQLTLVQLVGGLLVLTAAA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VISGQGGKP
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377 [H]