| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632317
Identifier: 221632317
GI number: 221632317
Start: 289788
End: 290636
Strand: Reverse
Name: 221632317
Synonym: trd_0283
Alternate gene names: NA
Gene position: 290636-289788 (Counterclockwise)
Preceding gene: 221632319
Following gene: 221632315
Centisome position: 14.51
GC content: 62.66
Gene sequence:
>849_bases ATGCCGGTGACACTCGCTGGTTACACGGTGGAACCACTCGTCGATGTCGAGGGAGCATTCTTCCCGCTCGCAATCGTTTT CCCCGATGTTCCACTCGAGTCCTGGGAACCGTACCGGGACCGCTTCCCGGACACCTTCGCCCGAGAGGACATGCTCTACA CGCGCGTCACCTGCTACCTGATCCGTGGCCATGGCCGCACCGTGCTCGTCGACGCGGGCATCGGTGCCGGTCCCGATCCG CTCTTCGGCCATCAGCGCGGGCGCTTACTCCAGGAATTGGCTCAGCGAGGGCTCGCACCAGGTGATATCGATACGGTCAT CCTGACGCATTTGCATCCTGACCATATCGGCTGGGCAGCACAGAGCGGCCAGCCGACCTTCCCGCGCGCCCGGTATCTGG TGCACGCTCGAGAACTCGAGACGTTCCAACGTGAAGACGTGCGCGCTGCTATGCACCAGATCGCACCTGGGTATCTCGAC CGTTGTCTCGATCCGCTCCAGCAGGCAGGAGTCCTGGCAACGGTAGACGATGACACCGAAATCGCGCCCGGACTCCACCT GACCATTTCGCCTGGCCACACACCCGGGATGATGCGTGTCGTCCTCCGTGGAACACCAGGCTCGCTCTGGCTCGTCGCTG ATACGTTCACGCATCCAGCTCAGGTGACCGAGCCGACCTGGTGTTCCGCGTTCGATATGGACCGGTCGCAAGCGATCGCG ACACGTTTCGAGGTGCTCGGTCGAGCCCATGAGGAGGACGCGCTCGTGATGGCGAGTCACTTTCCGACGATCCCCGGTCG GATCCGGCAAGAGAACGGTTCGTTCCGCTGGGAGCCGATCAGCGATTAA
Upstream 100 bases:
>100_bases GCTCTCGTCAATGAGACGATCGGCATGCCGGGCAAGTTCCCAGAGGGTTGCCGCCTTCGCGACCCGCTAGACTAGGACGG TGAGCGAAAGGAGCAACGCG
Downstream 100 bases:
>100_bases GACAAACCCTGCAGGAGGGTCGTCAGCGCGCTGCTCGCGACGAGGAGCAGAACGAGCACGGCGACGAAGATGATCGTCAC GGCCAAAAGCTGGACGAAAG
Product: beta-lactamase-like protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Beta-Lactamase; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Twin-Arginine Translocation Pathway Signal; Metallo-Beta-Lactamase; Zn-Dependent Hydrolase; Metal Dependent Hydrolase; Metal-Dependent Hydrolase; Hydrolase; Methyl Parathion Hydrolase; Beta-Lactamase Superfamily Hydrolase; Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily; Zn-Dependent Beta-Lactamase Domain Hydrolase; Metallo-Beta-Lactamase Protein; Organophosphate Pesticide Hydrolase; Zinc-Dependent Hydroxylase; Signal Peptide; Beta-Lactamase-Like Zn-Dependent Hydrolase Protein; Metallo-Beta-Lactamase Domain-Containing Protein; LOW QUALITY PROTEIN Beta-Lactamase; Signal Peptide Protein; Beta-Lactamase Class B; Zn-Dependent Hydrolase Including Glyoxylase-Like Protein; Metall Dependent Hydrolase; Zn-Dependent Hydrolase Including Glyoxylase
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MPVTLAGYTVEPLVDVEGAFFPLAIVFPDVPLESWEPYRDRFPDTFAREDMLYTRVTCYLIRGHGRTVLVDAGIGAGPDP LFGHQRGRLLQELAQRGLAPGDIDTVILTHLHPDHIGWAAQSGQPTFPRARYLVHARELETFQREDVRAAMHQIAPGYLD RCLDPLQQAGVLATVDDDTEIAPGLHLTISPGHTPGMMRVVLRGTPGSLWLVADTFTHPAQVTEPTWCSAFDMDRSQAIA TRFEVLGRAHEEDALVMASHFPTIPGRIRQENGSFRWEPISD
Sequences:
>Translated_282_residues MPVTLAGYTVEPLVDVEGAFFPLAIVFPDVPLESWEPYRDRFPDTFAREDMLYTRVTCYLIRGHGRTVLVDAGIGAGPDP LFGHQRGRLLQELAQRGLAPGDIDTVILTHLHPDHIGWAAQSGQPTFPRARYLVHARELETFQREDVRAAMHQIAPGYLD RCLDPLQQAGVLATVDDDTEIAPGLHLTISPGHTPGMMRVVLRGTPGSLWLVADTFTHPAQVTEPTWCSAFDMDRSQAIA TRFEVLGRAHEEDALVMASHFPTIPGRIRQENGSFRWEPISD >Mature_281_residues PVTLAGYTVEPLVDVEGAFFPLAIVFPDVPLESWEPYRDRFPDTFAREDMLYTRVTCYLIRGHGRTVLVDAGIGAGPDPL FGHQRGRLLQELAQRGLAPGDIDTVILTHLHPDHIGWAAQSGQPTFPRARYLVHARELETFQREDVRAAMHQIAPGYLDR CLDPLQQAGVLATVDDDTEIAPGLHLTISPGHTPGMMRVVLRGTPGSLWLVADTFTHPAQVTEPTWCSAFDMDRSQAIAT RFEVLGRAHEEDALVMASHFPTIPGRIRQENGSFRWEPISD
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31349; Mature: 31218
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTLAGYTVEPLVDVEGAFFPLAIVFPDVPLESWEPYRDRFPDTFAREDMLYTRVTCYL CCEEECCCEECCEEECCCCEEEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHEEEEEEE IRGHGRTVLVDAGIGAGPDPLFGHQRGRLLQELAQRGLAPGDIDTVILTHLHPDHIGWAA EECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCC QSGQPTFPRARYLVHARELETFQREDVRAAMHQIAPGYLDRCLDPLQQAGVLATVDDDTE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEEECCCCC IAPGLHLTISPGHTPGMMRVVLRGTPGSLWLVADTFTHPAQVTEPTWCSAFDMDRSQAIA CCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH TRFEVLGRAHEEDALVMASHFPTIPGRIRQENGSFRWEPISD HHHHHHHCCCCCCEEEEECCCCCCCCCEEECCCCEEECCCCC >Mature Secondary Structure PVTLAGYTVEPLVDVEGAFFPLAIVFPDVPLESWEPYRDRFPDTFAREDMLYTRVTCYL CEEECCCEECCEEECCCCEEEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHEEEEEEE IRGHGRTVLVDAGIGAGPDPLFGHQRGRLLQELAQRGLAPGDIDTVILTHLHPDHIGWAA EECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCC QSGQPTFPRARYLVHARELETFQREDVRAAMHQIAPGYLDRCLDPLQQAGVLATVDDDTE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEEECCCCC IAPGLHLTISPGHTPGMMRVVLRGTPGSLWLVADTFTHPAQVTEPTWCSAFDMDRSQAIA CCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH TRFEVLGRAHEEDALVMASHFPTIPGRIRQENGSFRWEPISD HHHHHHHCCCCCCEEEEECCCCCCCCCEEECCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA