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The map label for this gene is 221632310

Identifier: 221632310

GI number: 221632310

Start: 284720

End: 285475

Strand: Reverse

Name: 221632310

Synonym: trd_0277

Alternate gene names: NA

Gene position: 285475-284720 (Counterclockwise)

Preceding gene: 221632311

Following gene: 221632302

Centisome position: 14.25

GC content: 59.52

Gene sequence:

>756_bases
GTGTTTCCGATCGGCGACGACAATAGCGGAAGGCAGAGCTTCCCGATCGTCAACACCATCCTGATCGCGCTCAACGTCCT
CGTCTTTCTCTATCAGCTGCTCTTGCTGGCCCAATCGCCTCTCGCCCTGGAGAACTTCGTCTTCAAGTACGGCGCGATCC
CTTACGAACTCACACGTGGGGTGGATCTTCCGCCGACTGTTGGCTTTCCCATCTACCTCACGATTTTCACCTCGATGTTC
TTGCACGGAGGGTTCGCTCACCTGATCGGGAACATGTGGTACCTTTACATCTTTGGTGACAATGTCGAGGACTCGATGGG
ACATTTCCGGTACCTGATCTTCTATCTCCTCGGCGGCATCGCAGCCGCCTGGGCCCAAACCTTGCTGGACCCAGCCTCGC
GGATTCCGATGATCGGTGCATCGGGTGCCATCTCTGCCGTCATGGGAGCTTATCTCGTCCTCTATCCCGGCGGGCTCATC
CGTACCGTCGCCTTTTTCGGTTTCATTCCGTTCTTCTTCTATCTTCCCGCACTCATCCTCATCGGTCTCTGGTTTGTTTT
CCAGTTCTTTGCCGGCATCGCCTCGCTCGGTGTCCCGACCGCACCGACCGGTGGCGTCGCCTACTGGGCACACATCGGCG
GGTTCGTCGCCGGACTCGTCTTGGTCTGGTTCTTCCGGGATCCCGAGCGGGTCGAGCGCCAGCGTCTCGCCCGTCGGGCA
CACCGCGCCTTCCAGCGCCTGGAGCGTGGCTGGTGA

Upstream 100 bases:

>100_bases
AGCGCAAGAGGAAACCCGCCAAGGGGAGTGACCAGCGAACCGGGGAACAGATCGCCCCATCGCCCCCCACTTCGAGGTTG
CGAATGGAGGCCAGGAGACC

Downstream 100 bases:

>100_bases
GATCCGCGTCAGACGTGCATGCGCTCGTGTTCGAGAAGCCAGGCCTTGCACTGCAGGCCACCGGCATCACCGGTCGGTTT
GCCGCTCTGCCCGACGACGC

Product: putative integral membrane protein

Products: NA

Alternate protein names: Integral Membrane Protein; Peptidase; Rhomboid-Like Protein; S54 Family Peptidase; Peptidase Protein; Rhomboid Family Transmembrane Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Transmembrane Rhomboid Family Protein; Rhomboid-Family Protein; Subfamily; Rhomboid Serine Protease; Rhomboid Family Membrane Protein; Membrane Associated Serine Protease; Integral Membrane Rhomboid Family Protein; Regulatory Proteins IclR

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MFPIGDDNSGRQSFPIVNTILIALNVLVFLYQLLLLAQSPLALENFVFKYGAIPYELTRGVDLPPTVGFPIYLTIFTSMF
LHGGFAHLIGNMWYLYIFGDNVEDSMGHFRYLIFYLLGGIAAAWAQTLLDPASRIPMIGASGAISAVMGAYLVLYPGGLI
RTVAFFGFIPFFFYLPALILIGLWFVFQFFAGIASLGVPTAPTGGVAYWAHIGGFVAGLVLVWFFRDPERVERQRLARRA
HRAFQRLERGW

Sequences:

>Translated_251_residues
MFPIGDDNSGRQSFPIVNTILIALNVLVFLYQLLLLAQSPLALENFVFKYGAIPYELTRGVDLPPTVGFPIYLTIFTSMF
LHGGFAHLIGNMWYLYIFGDNVEDSMGHFRYLIFYLLGGIAAAWAQTLLDPASRIPMIGASGAISAVMGAYLVLYPGGLI
RTVAFFGFIPFFFYLPALILIGLWFVFQFFAGIASLGVPTAPTGGVAYWAHIGGFVAGLVLVWFFRDPERVERQRLARRA
HRAFQRLERGW
>Mature_251_residues
MFPIGDDNSGRQSFPIVNTILIALNVLVFLYQLLLLAQSPLALENFVFKYGAIPYELTRGVDLPPTVGFPIYLTIFTSMF
LHGGFAHLIGNMWYLYIFGDNVEDSMGHFRYLIFYLLGGIAAAWAQTLLDPASRIPMIGASGAISAVMGAYLVLYPGGLI
RTVAFFGFIPFFFYLPALILIGLWFVFQFFAGIASLGVPTAPTGGVAYWAHIGGFVAGLVLVWFFRDPERVERQRLARRA
HRAFQRLERGW

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28020; Mature: 28020

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPIGDDNSGRQSFPIVNTILIALNVLVFLYQLLLLAQSPLALENFVFKYGAIPYELTRG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCC
VDLPPTVGFPIYLTIFTSMFLHGGFAHLIGNMWYLYIFGDNVEDSMGHFRYLIFYLLGGI
CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
AAAWAQTLLDPASRIPMIGASGAISAVMGAYLVLYPGGLIRTVAFFGFIPFFFYLPALIL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
IGLWFVFQFFAGIASLGVPTAPTGGVAYWAHIGGFVAGLVLVWFFRDPERVERQRLARRA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
HRAFQRLERGW
HHHHHHHHCCC
>Mature Secondary Structure
MFPIGDDNSGRQSFPIVNTILIALNVLVFLYQLLLLAQSPLALENFVFKYGAIPYELTRG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCC
VDLPPTVGFPIYLTIFTSMFLHGGFAHLIGNMWYLYIFGDNVEDSMGHFRYLIFYLLGGI
CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
AAAWAQTLLDPASRIPMIGASGAISAVMGAYLVLYPGGLIRTVAFFGFIPFFFYLPALIL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
IGLWFVFQFFAGIASLGVPTAPTGGVAYWAHIGGFVAGLVLVWFFRDPERVERQRLARRA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
HRAFQRLERGW
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA