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The map label for this gene is spsL [H]

Identifier: 221632270

GI number: 221632270

Start: 247226

End: 247681

Strand: Reverse

Name: spsL [H]

Synonym: trd_0236

Alternate gene names: 221632270

Gene position: 247681-247226 (Counterclockwise)

Preceding gene: 221632271

Following gene: 221632269

Centisome position: 12.37

GC content: 57.24

Gene sequence:

>456_bases
GTGATCCACGGTGTCGAAATCAAGCGGCTGGTTACCCACGTCGACGAGCGCGGTTCGCTGACCGAACTCATTCGCTGCGA
CGATCCCTTCTTCGAGAAGTTCGGTCAGTGCTACGTGTCCGTCTCTTGGCCCGGGGTCATCCGCGCCTGGCATTGGCACA
AGAAACAGACCGATTACTTCGTCTGCATCCGCGGGATGATCAAGGTTCCCTTGTTCGACCTGCGTCCGGAGTCACCGACC
TACCGCGAGCTCAACGAATTCTTCCTGGGCGATGACAATCGGATCGTTCTCAAGATTCCGCCGGGTGTCGCACACGGGTT
CAAGAACATTGGGACGGAACCCTGTTATCTACTCAACTTCCCGACCGAGCCCTACGATGCGGACGATCCGGACGAATATC
GCTTGCCCTACGACACACCGGAAATCCCGTACTCGTGGGAGATCAAGTATCGCTGA

Upstream 100 bases:

>100_bases
TACCGACGAGAGCCCGCAGATGTTCGTCGTGGCGCAGCGCCAGCTTTCCCCGGCTATACTCGCTCCGCGTCGAGCGTGAG
ATCGTTGCGGAGGCACGGCT

Downstream 100 bases:

>100_bases
AGGAGCTGCTGTGACACTGCATCGCACCTATCCGCCTCGCTTGCCCATTCGACCCGCCGAGCAGCCGGTCGACGCCATCG
TCCGGCTCCCGGGTTCGAAG

Product: dTDP-4-dehydrorhamnose 3,5-epimerase

Products: dTDP-4-dehydro-6-deoxy-L-mannose

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MIHGVEIKRLVTHVDERGSLTELIRCDDPFFEKFGQCYVSVSWPGVIRAWHWHKKQTDYFVCIRGMIKVPLFDLRPESPT
YRELNEFFLGDDNRIVLKIPPGVAHGFKNIGTEPCYLLNFPTEPYDADDPDEYRLPYDTPEIPYSWEIKYR

Sequences:

>Translated_151_residues
MIHGVEIKRLVTHVDERGSLTELIRCDDPFFEKFGQCYVSVSWPGVIRAWHWHKKQTDYFVCIRGMIKVPLFDLRPESPT
YRELNEFFLGDDNRIVLKIPPGVAHGFKNIGTEPCYLLNFPTEPYDADDPDEYRLPYDTPEIPYSWEIKYR
>Mature_151_residues
MIHGVEIKRLVTHVDERGSLTELIRCDDPFFEKFGQCYVSVSWPGVIRAWHWHKKQTDYFVCIRGMIKVPLFDLRPESPT
YRELNEFFLGDDNRIVLKIPPGVAHGFKNIGTEPCYLLNFPTEPYDADDPDEYRLPYDTPEIPYSWEIKYR

Specific function: Unknown

COG id: COG1898

COG function: function code M; dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To dTDP-4-dehydrorhamnose reductase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR000888
- InterPro:   IPR014710
- ProDom:   PD001462 [H]

Pfam domain/function: PF00908 dTDP_sugar_isom [H]

EC number: 5.1.3.13

Molecular weight: Translated: 17858; Mature: 17858

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHGVEIKRLVTHVDERGSLTELIRCDDPFFEKFGQCYVSVSWPGVIRAWHWHKKQTDYF
CCCCHHHHHHHHHCCCCCCHHHHHCCCCHHHHHCCCEEEEEECCCCEEEEECCCCCCCEE
VCIRGMIKVPLFDLRPESPTYRELNEFFLGDDNRIVLKIPPGVAHGFKNIGTEPCYLLNF
EEEEHHHHCCEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCEEEEEC
PTEPYDADDPDEYRLPYDTPEIPYSWEIKYR
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MIHGVEIKRLVTHVDERGSLTELIRCDDPFFEKFGQCYVSVSWPGVIRAWHWHKKQTDYF
CCCCHHHHHHHHHCCCCCCHHHHHCCCCHHHHHCCCEEEEEECCCCEEEEECCCCCCCEE
VCIRGMIKVPLFDLRPESPTYRELNEFFLGDDNRIVLKIPPGVAHGFKNIGTEPCYLLNF
EEEEHHHHCCEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCEEEEEC
PTEPYDADDPDEYRLPYDTPEIPYSWEIKYR
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: dTDP-4-dehydro-6-deoxy-D-glucose

Specific reaction: dTDP-4-dehydro-6-deoxy-D-glucose = dTDP-4-dehydro-6-deoxy-L-mannose

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]