Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632259

Identifier: 221632259

GI number: 221632259

Start: 236968

End: 237228

Strand: Reverse

Name: 221632259

Synonym: trd_0225

Alternate gene names: NA

Gene position: 237228-236968 (Counterclockwise)

Preceding gene: 221632260

Following gene: 221632258

Centisome position: 11.84

GC content: 63.98

Gene sequence:

>261_bases
GTGCTTCCCGCTGAACCACGTTCGTTGCTCGGCTGGCTGGTGATCGGCTTCCTCGCTGGGTGGTTGGCCGGACTCCTGAC
ACGCGGGCGCGGATTCGGTTGTTTGGGCAATATCGCGATCGGGCTGCTGGGTGCGGTTGTCGGCGGTTATCTCTTTCAGC
TGCTGGGCGTCCGGGGACCAGCTGGCTTCTTGGGAAGTCTCCTGGTCGCACTCGTCGGTGCCGGCGTTCTCCTGCTCGTC
GTCAATCTGATGCGCCGCTGA

Upstream 100 bases:

>100_bases
GACCACGAACTCCTGCAACGGTGTCCACCGGATCCCTTCGCCCACCAGGGGCCGGTTTACGAGGGAGATCAGCTCGAGCG
ACCAGAGGGAGGAGAGCAGG

Downstream 100 bases:

>100_bases
GGAGCGAGAGAGGCGCGCGCTGATGTCGCATCCACCGCTCGTCCGACTCGACTGCATAAGCAAAGTCTACCGAGACGGGC
AGCGCGAAATCGTGGCGCTC

Product: Transglycosylase associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MLPAEPRSLLGWLVIGFLAGWLAGLLTRGRGFGCLGNIAIGLLGAVVGGYLFQLLGVRGPAGFLGSLLVALVGAGVLLLV
VNLMRR

Sequences:

>Translated_86_residues
MLPAEPRSLLGWLVIGFLAGWLAGLLTRGRGFGCLGNIAIGLLGAVVGGYLFQLLGVRGPAGFLGSLLVALVGAGVLLLV
VNLMRR
>Mature_86_residues
MLPAEPRSLLGWLVIGFLAGWLAGLLTRGRGFGCLGNIAIGLLGAVVGGYLFQLLGVRGPAGFLGSLLVALVGAGVLLLV
VNLMRR

Specific function: Unknown

COG id: COG2261

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8814; Mature: 8814

Theoretical pI: Translated: 12.20; Mature: 12.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPAEPRSLLGWLVIGFLAGWLAGLLTRGRGFGCLGNIAIGLLGAVVGGYLFQLLGVRGP
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
AGFLGSLLVALVGAGVLLLVVNLMRR
HHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLPAEPRSLLGWLVIGFLAGWLAGLLTRGRGFGCLGNIAIGLLGAVVGGYLFQLLGVRGP
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
AGFLGSLLVALVGAGVLLLVVNLMRR
HHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA