| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632237
Identifier: 221632237
GI number: 221632237
Start: 208795
End: 209781
Strand: Reverse
Name: 221632237
Synonym: trd_0203
Alternate gene names: NA
Gene position: 209781-208795 (Counterclockwise)
Preceding gene: 221632238
Following gene: 221632236
Centisome position: 10.47
GC content: 66.36
Gene sequence:
>987_bases GTGTTCTGGTGGCGAGCCAACAACGCACCGATGATCGCCGATGACTCGCCCGATCAGCCGGCAGCTGCATTGCGCGGTGA TTTGGTCGCACTGCCAGCTGCTTTTCATCTCTCGCCCATTCGGGGACTGCTCGGCAGTGCGTTCGGCGCAGCAACCGGCC GGTTCGTCCACGAGCGCGGACAGCGAGCCTACGCGCAAGTCATCGCAGAACCCGGACGCGATCATTGGTTCATCGCTCGC CTGGTCGTCTCGAGGGCAGAAGAGGGACAGCGCTTGCTGGATCGTCTGGCCCGGGAGGCTGGTCTACGCGGGGTCATCCG CCTGCACACCTTGATTCCGGAGCACCCGGACCTCATCGCCTGGTGGCAGCGAGCCGGTTTCACACCGTTCCGGCGGATAC ACCTGCTCGCCGGCCAGCGGGAGCAACTCGCACTGCCGAGTCAGTCGCTGACCATTCGTCACCAGCAAGCGCTCGATGCA TGGGAGGTTCAGCGCCTGTACGAGCGCGTCACCCCACGACCAGTTCAGTTCGCCGAGGCACGCACCCGGGCGGCCTGGCA CGTGGGGCAGCGAGCCGGCTGGCGTATCCGTGGCTACTTGCTCACAGCTGACGGTGAGACACGAGCCTACTGCCGCGTTC GCTCGCGCGCTGGTTGGCACATCGTGGAACTGGTCGCGGAAGACCAGGCCGCCAGCGAGGCTATCGCGATCGTGGGAGCA GCGCTCGCTTGCTGCGCGCGCCCGCGCGATCAGGTGCTGCTCCTGCTTCCCGATGAGGCAGGAGCCACACGCGCACGCTT CGAGCAGGCGGGACTCACGCTGCTCGAGACACGGCTTTGGGTCGCACGCTATACGATCCGACGCATCCGCGCCGGATTTC CCATCGCCGAGCATGCCCGGCTGGCTGGACTCGCTGAGGCACCACGCGTGCTCTACCACCACGAGCGACCGAAGGTCGCC GTGCTGGAACGCGCGACACGATCATGA
Upstream 100 bases:
>100_bases GGGTGGCGACCTGGAGTACGCCGACGAGATCACGTTGGGTCGCGCGCTCGCTGGACGACGCGCGCTCTGAAGCTCTGAAG CGCGCGGAGGAGGTCCTGGC
Downstream 100 bases:
>100_bases AACGAAGAGGAGGACGACGACGCGCACCGTGACGAAGCCTGTTACCATTCTTCCGGCAATGCCGGAACAGACGATCACCG ATAATCTCGAGGATCTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MFWWRANNAPMIADDSPDQPAAALRGDLVALPAAFHLSPIRGLLGSAFGAATGRFVHERGQRAYAQVIAEPGRDHWFIAR LVVSRAEEGQRLLDRLAREAGLRGVIRLHTLIPEHPDLIAWWQRAGFTPFRRIHLLAGQREQLALPSQSLTIRHQQALDA WEVQRLYERVTPRPVQFAEARTRAAWHVGQRAGWRIRGYLLTADGETRAYCRVRSRAGWHIVELVAEDQAASEAIAIVGA ALACCARPRDQVLLLLPDEAGATRARFEQAGLTLLETRLWVARYTIRRIRAGFPIAEHARLAGLAEAPRVLYHHERPKVA VLERATRS
Sequences:
>Translated_328_residues MFWWRANNAPMIADDSPDQPAAALRGDLVALPAAFHLSPIRGLLGSAFGAATGRFVHERGQRAYAQVIAEPGRDHWFIAR LVVSRAEEGQRLLDRLAREAGLRGVIRLHTLIPEHPDLIAWWQRAGFTPFRRIHLLAGQREQLALPSQSLTIRHQQALDA WEVQRLYERVTPRPVQFAEARTRAAWHVGQRAGWRIRGYLLTADGETRAYCRVRSRAGWHIVELVAEDQAASEAIAIVGA ALACCARPRDQVLLLLPDEAGATRARFEQAGLTLLETRLWVARYTIRRIRAGFPIAEHARLAGLAEAPRVLYHHERPKVA VLERATRS >Mature_328_residues MFWWRANNAPMIADDSPDQPAAALRGDLVALPAAFHLSPIRGLLGSAFGAATGRFVHERGQRAYAQVIAEPGRDHWFIAR LVVSRAEEGQRLLDRLAREAGLRGVIRLHTLIPEHPDLIAWWQRAGFTPFRRIHLLAGQREQLALPSQSLTIRHQQALDA WEVQRLYERVTPRPVQFAEARTRAAWHVGQRAGWRIRGYLLTADGETRAYCRVRSRAGWHIVELVAEDQAASEAIAIVGA ALACCARPRDQVLLLLPDEAGATRARFEQAGLTLLETRLWVARYTIRRIRAGFPIAEHARLAGLAEAPRVLYHHERPKVA VLERATRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36871; Mature: 36871
Theoretical pI: Translated: 11.29; Mature: 11.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFWWRANNAPMIADDSPDQPAAALRGDLVALPAAFHLSPIRGLLGSAFGAATGRFVHERG CCEEECCCCCEECCCCCCCCHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRAYAQVIAEPGRDHWFIARLVVSRAEEGQRLLDRLAREAGLRGVIRLHTLIPEHPDLIA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHH WWQRAGFTPFRRIHLLAGQREQLALPSQSLTIRHQQALDAWEVQRLYERVTPRPVQFAEA HHHHCCCCHHHHHHHHCCCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHH RTRAAWHVGQRAGWRIRGYLLTADGETRAYCRVRSRAGWHIVELVAEDQAASEAIAIVGA HHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHH ALACCARPRDQVLLLLPDEAGATRARFEQAGLTLLETRLWVARYTIRRIRAGFPIAEHAR HHHHHCCCCCCEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LAGLAEAPRVLYHHERPKVAVLERATRS HHHHHHCCHHHHCCCCCCHHHHHHHHCC >Mature Secondary Structure MFWWRANNAPMIADDSPDQPAAALRGDLVALPAAFHLSPIRGLLGSAFGAATGRFVHERG CCEEECCCCCEECCCCCCCCHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRAYAQVIAEPGRDHWFIARLVVSRAEEGQRLLDRLAREAGLRGVIRLHTLIPEHPDLIA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHH WWQRAGFTPFRRIHLLAGQREQLALPSQSLTIRHQQALDAWEVQRLYERVTPRPVQFAEA HHHHCCCCHHHHHHHHCCCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHH RTRAAWHVGQRAGWRIRGYLLTADGETRAYCRVRSRAGWHIVELVAEDQAASEAIAIVGA HHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHH ALACCARPRDQVLLLLPDEAGATRARFEQAGLTLLETRLWVARYTIRRIRAGFPIAEHAR HHHHHCCCCCCEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LAGLAEAPRVLYHHERPKVAVLERATRS HHHHHHCCHHHHCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA