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The map label for this gene is recO [H]

Identifier: 221632230

GI number: 221632230

Start: 203034

End: 203870

Strand: Reverse

Name: recO [H]

Synonym: trd_0196

Alternate gene names: 221632230

Gene position: 203870-203034 (Counterclockwise)

Preceding gene: 221632231

Following gene: 221632229

Centisome position: 10.18

GC content: 66.19

Gene sequence:

>837_bases
GTGATCGGCGAGCGAGGCATGGCCGAAACGACGAACCACCGCATCCGGCTGTACCGCACCGAGGCGATCGTCCTGCGCCG
CCGCGACCTCGGCGAGGCCGACAGGATCCTGACGCTCTTCACTCCGAAAGCAGGAAAACTCCGGGTCATCGCAAAAGGAA
TACGCCGGCCGCAGAGTCGCCTGGCCGGCCATCTCGACCTCTTCGTTCGGACCCAAGTCCTGCTCGCCCGCGGGCGCGAA
CTCGATATCGTGACACAAGCGCAGCTGGTGGAGCCGTTCACTGGACTGCGCCGGGAACCCTGGCGAGCAGGCTGGGCCGG
TTACCTCGCCGACCTGACCGATCGAGCGACCGTCGACGAGGATCCGCAACCGGCGCTTTACGACCTCCTGCTCGAGTGCC
TCCGACTGCTCGCCGAGTTGCCCGATCCTTTCGCGGTCGTAAGACGGTTCGAGATGCGCTTGCTGGTTCTCCTCGGTTAT
CAGCCGGAACTCGTCGTCTGCCCACACTGCGGGAAACAACTGACGCCGGGGCGGCTCGCCTTCGCACCGGATCACGGTGG
CATCCTTTGCGGCGAGTGCGTGGGACACAGCGCTGGAGAAGTCCCGCTCAGCGTCGGGGCCGTCAAGGCTTTGCGCCTCT
TGCTGGCCGATCACTGGCAGGAACTCGCCCGCCGACCGCTCAGCCTCGCCTTGCGCGGCCAGATCACGAGTGCCCTCCAG
GCAGCGCTCCAGGCGCACATCGGCGACATCGCTGCCTCCGCCGCCGTGGCGACACTCTTGCAGGAAGAGGGGCACGATGA
TGGACATCCTCCATCCCTGGCAGGAACGAGCAGCTGA

Upstream 100 bases:

>100_bases
ATCGCACGCTGGTTGCGCGCCGCGACTGGGCTGGATTGCGGGAACGCGCTCACCAATGGGCGGAACTGGTCGCTCACCCG
GATATCGGCGTTCCGGCATC

Downstream 100 bases:

>100_bases
GCGAGCGCAGATACTCGCCCAGCGTTATCACCACACTCCTGACGCGCTCATCGTCCTCGGCTCCGGGCTGGCGACTCTCC
CTGAAGACGCGCATGTCGTG

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MIGERGMAETTNHRIRLYRTEAIVLRRRDLGEADRILTLFTPKAGKLRVIAKGIRRPQSRLAGHLDLFVRTQVLLARGRE
LDIVTQAQLVEPFTGLRREPWRAGWAGYLADLTDRATVDEDPQPALYDLLLECLRLLAELPDPFAVVRRFEMRLLVLLGY
QPELVVCPHCGKQLTPGRLAFAPDHGGILCGECVGHSAGEVPLSVGAVKALRLLLADHWQELARRPLSLALRGQITSALQ
AALQAHIGDIAASAAVATLLQEEGHDDGHPPSLAGTSS

Sequences:

>Translated_278_residues
MIGERGMAETTNHRIRLYRTEAIVLRRRDLGEADRILTLFTPKAGKLRVIAKGIRRPQSRLAGHLDLFVRTQVLLARGRE
LDIVTQAQLVEPFTGLRREPWRAGWAGYLADLTDRATVDEDPQPALYDLLLECLRLLAELPDPFAVVRRFEMRLLVLLGY
QPELVVCPHCGKQLTPGRLAFAPDHGGILCGECVGHSAGEVPLSVGAVKALRLLLADHWQELARRPLSLALRGQITSALQ
AALQAHIGDIAASAAVATLLQEEGHDDGHPPSLAGTSS
>Mature_278_residues
MIGERGMAETTNHRIRLYRTEAIVLRRRDLGEADRILTLFTPKAGKLRVIAKGIRRPQSRLAGHLDLFVRTQVLLARGRE
LDIVTQAQLVEPFTGLRREPWRAGWAGYLADLTDRATVDEDPQPALYDLLLECLRLLAELPDPFAVVRRFEMRLLVLLGY
QPELVVCPHCGKQLTPGRLAFAPDHGGILCGECVGHSAGEVPLSVGAVKALRLLLADHWQELARRPLSLALRGQITSALQ
AALQAHIGDIAASAAVATLLQEEGHDDGHPPSLAGTSS

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 30447; Mature: 30447

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGERGMAETTNHRIRLYRTEAIVLRRRDLGEADRILTLFTPKAGKLRVIAKGIRRPQSR
CCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHCCHHHH
LAGHLDLFVRTQVLLARGRELDIVTQAQLVEPFTGLRREPWRAGWAGYLADLTDRATVDE
HHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC
DPQPALYDLLLECLRLLAELPDPFAVVRRFEMRLLVLLGYQPELVVCPHCGKQLTPGRLA
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCEEECCCCCCCCCCCCEE
FAPDHGGILCGECVGHSAGEVPLSVGAVKALRLLLADHWQELARRPLSLALRGQITSALQ
ECCCCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AALQAHIGDIAASAAVATLLQEEGHDDGHPPSLAGTSS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIGERGMAETTNHRIRLYRTEAIVLRRRDLGEADRILTLFTPKAGKLRVIAKGIRRPQSR
CCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHCCHHHH
LAGHLDLFVRTQVLLARGRELDIVTQAQLVEPFTGLRREPWRAGWAGYLADLTDRATVDE
HHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC
DPQPALYDLLLECLRLLAELPDPFAVVRRFEMRLLVLLGYQPELVVCPHCGKQLTPGRLA
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCEEECCCCCCCCCCCCEE
FAPDHGGILCGECVGHSAGEVPLSVGAVKALRLLLADHWQELARRPLSLALRGQITSALQ
ECCCCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AALQAHIGDIAASAAVATLLQEEGHDDGHPPSLAGTSS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA