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The map label for this gene is ugpA [C]

Identifier: 221632170

GI number: 221632170

Start: 143893

End: 144774

Strand: Reverse

Name: ugpA [C]

Synonym: trd_0136

Alternate gene names: 221632170

Gene position: 144774-143893 (Counterclockwise)

Preceding gene: 221632171

Following gene: 221632169

Centisome position: 7.23

GC content: 59.64

Gene sequence:

>882_bases
GTGCGTCACGCGAAGCGCGCCGGCTACATCTTCGTTGGGCCAGCGACACTGCTCCTTTTGCTCTATGCTCTCGTGCCGCT
CCTTTGGACACTGTACTATGCTGTCTATCGCTTTTCTCCGAATCCGTCCGTCCCGCCGGAATTCACGGGGATCGGCAACT
TCCTCGATCTCTGGGCCGATCCGCAGTTCCGTGGGGCACTGCTCAACACGCTTCTGCTCGGCCTCATCGGGATCCCCCTT
CAGCTCCTTCTCGGCTTTCTCGCTGCCCTCGGGCTCTCCGCATTGGATCACTCTCGCTGGTTTGGGCTCCTCTTCGCAGC
GGTCATGCTCCCCATCGCTGTCGCCCCCATCGTTGCAGGGATCGCCTGGTGGTTACTCTTCAACACACGCTTTGGTGCCG
TCAACGGCATCCTGCTCCGACTCGGTGCACCCCTGATCGATTGGACGGTCAGTATGCCATGGGCTCTCCTAACCATCGTT
GTGGCATTCGTCTGGTTCGGGACACCGGTCGCAGCTGTACTTCTCTATAGTGGCCTCACCTCGATCCCCCGCACCCTCGT
CGAAGCGGCCCGAGTCGACGGGGCAACTGGCCTGCAACTCGTGCGAGCGATTATTCTACCGCTCCTTCAACCATTTTTTG
GACTGAGCGGTATTTTCCTCCTGACGGAACTCCTGCGGCTGTATGAGCTCCCCTTCTATCTGACCCAGGGGGGACCTGGT
AACAGCACTGTCGTGCTTGGGATCTATCTGTTCAAACTCGCTTTCAACTTCTTCGACCTCGGTCGTTCTGCCGCGCTCGC
GCTGCTCTACGTGATCCTCTTGTCTCTGGTCGCGATCGGCTATGTCCGCCTGCTCGCGCGCACGGCTCAGGAGACGGCTT
AA

Upstream 100 bases:

>100_bases
GCTGGACTGCTCGCCTTGCTCCCCGCTCTGCTGGTCACCGGATTTCTCCGTCGGTACATCGTTCGCGGCCTGACTCTCGG
CGGTGGAAGGGAGCTCTGAG

Downstream 100 bases:

>100_bases
CGGTAGCGAGGAAGCGTGTTGGTTCAAACGCAGCGGAAAGGAGGAGTTGGCATGGCGGACCGTTTGACGCGGCGGGAGGT
CCTGCGAGCCGGAACTGGTG

Product: putative multiple sugar transport system permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MRHAKRAGYIFVGPATLLLLLYALVPLLWTLYYAVYRFSPNPSVPPEFTGIGNFLDLWADPQFRGALLNTLLLGLIGIPL
QLLLGFLAALGLSALDHSRWFGLLFAAVMLPIAVAPIVAGIAWWLLFNTRFGAVNGILLRLGAPLIDWTVSMPWALLTIV
VAFVWFGTPVAAVLLYSGLTSIPRTLVEAARVDGATGLQLVRAIILPLLQPFFGLSGIFLLTELLRLYELPFYLTQGGPG
NSTVVLGIYLFKLAFNFFDLGRSAALALLYVILLSLVAIGYVRLLARTAQETA

Sequences:

>Translated_293_residues
MRHAKRAGYIFVGPATLLLLLYALVPLLWTLYYAVYRFSPNPSVPPEFTGIGNFLDLWADPQFRGALLNTLLLGLIGIPL
QLLLGFLAALGLSALDHSRWFGLLFAAVMLPIAVAPIVAGIAWWLLFNTRFGAVNGILLRLGAPLIDWTVSMPWALLTIV
VAFVWFGTPVAAVLLYSGLTSIPRTLVEAARVDGATGLQLVRAIILPLLQPFFGLSGIFLLTELLRLYELPFYLTQGGPG
NSTVVLGIYLFKLAFNFFDLGRSAALALLYVILLSLVAIGYVRLLARTAQETA
>Mature_293_residues
MRHAKRAGYIFVGPATLLLLLYALVPLLWTLYYAVYRFSPNPSVPPEFTGIGNFLDLWADPQFRGALLNTLLLGLIGIPL
QLLLGFLAALGLSALDHSRWFGLLFAAVMLPIAVAPIVAGIAWWLLFNTRFGAVNGILLRLGAPLIDWTVSMPWALLTIV
VAFVWFGTPVAAVLLYSGLTSIPRTLVEAARVDGATGLQLVRAIILPLLQPFFGLSGIFLLTELLRLYELPFYLTQGGPG
NSTVVLGIYLFKLAFNFFDLGRSAALALLYVILLSLVAIGYVRLLARTAQETA

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=286, Percent_Identity=29.7202797202797, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787570, Length=269, Percent_Identity=27.8810408921933, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31945; Mature: 31945

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHAKRAGYIFVGPATLLLLLYALVPLLWTLYYAVYRFSPNPSVPPEFTGIGNFLDLWAD
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
PQFRGALLNTLLLGLIGIPLQLLLGFLAALGLSALDHSRWFGLLFAAVMLPIAVAPIVAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAWWLLFNTRFGAVNGILLRLGAPLIDWTVSMPWALLTIVVAFVWFGTPVAAVLLYSGLT
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIPRTLVEAARVDGATGLQLVRAIILPLLQPFFGLSGIFLLTELLRLYELPFYLTQGGPG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHEECCCCC
NSTVVLGIYLFKLAFNFFDLGRSAALALLYVILLSLVAIGYVRLLARTAQETA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRHAKRAGYIFVGPATLLLLLYALVPLLWTLYYAVYRFSPNPSVPPEFTGIGNFLDLWAD
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
PQFRGALLNTLLLGLIGIPLQLLLGFLAALGLSALDHSRWFGLLFAAVMLPIAVAPIVAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAWWLLFNTRFGAVNGILLRLGAPLIDWTVSMPWALLTIVVAFVWFGTPVAAVLLYSGLT
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIPRTLVEAARVDGATGLQLVRAIILPLLQPFFGLSGIFLLTELLRLYELPFYLTQGGPG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHEECCCCC
NSTVVLGIYLFKLAFNFFDLGRSAALALLYVILLSLVAIGYVRLLARTAQETA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]