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The map label for this gene is ycjP [C]

Identifier: 221632171

GI number: 221632171

Start: 144776

End: 145684

Strand: Reverse

Name: ycjP [C]

Synonym: trd_0137

Alternate gene names: 221632171

Gene position: 145684-144776 (Counterclockwise)

Preceding gene: 221632172

Following gene: 221632170

Centisome position: 7.27

GC content: 58.2

Gene sequence:

>909_bases
ATGCGCACCAGCGAAGCAACGACCGGGCCGTATCCCATCGTCCCGGCTGAAGTAGCCCGACCGATCCGCTCAACGGGGAG
GCGGCTCCGTCACCGACTGATTTGGGCGACCATGATCATCTTTGCCTTATTCTGCATTGTACCGATCTACTGGATACTCA
TCACTGCACTTCGCCCGCGGGGTGAGATCTTTGAATCACCAGCCCTACTCTACCCACAACATATTACTCTTGACAATCTT
CGCTATGTCTGGCTCGGATCGCAAACGAACGATCCGGTACTTCCCTTCGTCTTCACCAGCTTTCTCGTGGCGACCGCGAG
TGCATGCCTGACGCTGTTCCTGTCGCTGCCAGCAGCGTATGCACTCTCCCGTTGGCGAGTCGGCGGTAACCACCTCGCCA
TGTGGATACTCTCCCAGCGATTCATTCCACCCATCGCCGTTATCGTTCCCTTATATCTGCTCTACCGTCGTATTGGTTGG
CTGGATACCTATCATGGGCTGATTCTCCTCTACACGGTCATCAACATTCCGATTACCGTCTGGATTCTCCGCAACTACAT
CGATGCTCTCCCACGCGACATCGAAGAGGCTGCGCTCGTGGATGGAGCCACGCCCGTACAGATTCTGCGGCATATCGTCC
TCCCCCTGTCGTGGCCGAGTCTCGGGGCTGCAGCCATTCTGGCATTCCTGGCGATCTGGAACGAGTACGTGTTCGCTTAT
CAGCTGGCCGGACGGAATGTCGCGATGGTGACGGTCTATTTCCCGCGCCTCCGCTCAGCGATCGGAGAACTCTACGGGGA
GGTCGCAGCGGCTGGACTGCTCGCCTTGCTCCCCGCTCTGCTGGTCACCGGATTTCTCCGTCGGTACATCGTTCGCGGCC
TGACTCTCGGCGGTGGAAGGGAGCTCTGA

Upstream 100 bases:

>100_bases
CGCTCGCCACAAGACGTACCTCAACCCTATTGACATGCCAATGCTATTCCATTATCATGCTGGTAGCTGATCGGCGGTCG
CAGAACCAAAGGACGGGGAC

Downstream 100 bases:

>100_bases
GGTGCGTCACGCGAAGCGCGCCGGCTACATCTTCGTTGGGCCAGCGACACTGCTCCTTTTGCTCTATGCTCTCGTGCCGC
TCCTTTGGACACTGTACTAT

Product: sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MRTSEATTGPYPIVPAEVARPIRSTGRRLRHRLIWATMIIFALFCIVPIYWILITALRPRGEIFESPALLYPQHITLDNL
RYVWLGSQTNDPVLPFVFTSFLVATASACLTLFLSLPAAYALSRWRVGGNHLAMWILSQRFIPPIAVIVPLYLLYRRIGW
LDTYHGLILLYTVINIPITVWILRNYIDALPRDIEEAALVDGATPVQILRHIVLPLSWPSLGAAAILAFLAIWNEYVFAY
QLAGRNVAMVTVYFPRLRSAIGELYGEVAAAGLLALLPALLVTGFLRRYIVRGLTLGGGREL

Sequences:

>Translated_302_residues
MRTSEATTGPYPIVPAEVARPIRSTGRRLRHRLIWATMIIFALFCIVPIYWILITALRPRGEIFESPALLYPQHITLDNL
RYVWLGSQTNDPVLPFVFTSFLVATASACLTLFLSLPAAYALSRWRVGGNHLAMWILSQRFIPPIAVIVPLYLLYRRIGW
LDTYHGLILLYTVINIPITVWILRNYIDALPRDIEEAALVDGATPVQILRHIVLPLSWPSLGAAAILAFLAIWNEYVFAY
QLAGRNVAMVTVYFPRLRSAIGELYGEVAAAGLLALLPALLVTGFLRRYIVRGLTLGGGREL
>Mature_302_residues
MRTSEATTGPYPIVPAEVARPIRSTGRRLRHRLIWATMIIFALFCIVPIYWILITALRPRGEIFESPALLYPQHITLDNL
RYVWLGSQTNDPVLPFVFTSFLVATASACLTLFLSLPAAYALSRWRVGGNHLAMWILSQRFIPPIAVIVPLYLLYRRIGW
LDTYHGLILLYTVINIPITVWILRNYIDALPRDIEEAALVDGATPVQILRHIVLPLSWPSLGAAAILAFLAIWNEYVFAY
QLAGRNVAMVTVYFPRLRSAIGELYGEVAAAGLLALLPALLVTGFLRRYIVRGLTLGGGREL

Specific function: May participate in oleandomycin secretion during antibiotic production [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=280, Percent_Identity=28.5714285714286, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1790464, Length=265, Percent_Identity=31.6981132075472, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1789860, Length=265, Percent_Identity=27.5471698113208, Blast_Score=85, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33879; Mature: 33879

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTSEATTGPYPIVPAEVARPIRSTGRRLRHRLIWATMIIFALFCIVPIYWILITALRPR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GEIFESPALLYPQHITLDNLRYVWLGSQTNDPVLPFVFTSFLVATASACLTLFLSLPAAY
CHHHCCCCCCCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSRWRVGGNHLAMWILSQRFIPPIAVIVPLYLLYRRIGWLDTYHGLILLYTVINIPITV
HHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WILRNYIDALPRDIEEAALVDGATPVQILRHIVLPLSWPSLGAAAILAFLAIWNEYVFAY
HHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
QLAGRNVAMVTVYFPRLRSAIGELYGEVAAAGLLALLPALLVTGFLRRYIVRGLTLGGGR
HCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EL
CC
>Mature Secondary Structure
MRTSEATTGPYPIVPAEVARPIRSTGRRLRHRLIWATMIIFALFCIVPIYWILITALRPR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GEIFESPALLYPQHITLDNLRYVWLGSQTNDPVLPFVFTSFLVATASACLTLFLSLPAAY
CHHHCCCCCCCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSRWRVGGNHLAMWILSQRFIPPIAVIVPLYLLYRRIGWLDTYHGLILLYTVINIPITV
HHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WILRNYIDALPRDIEEAALVDGATPVQILRHIVLPLSWPSLGAAAILAFLAIWNEYVFAY
HHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
QLAGRNVAMVTVYFPRLRSAIGELYGEVAAAGLLALLPALLVTGFLRRYIVRGLTLGGGR
HCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8244027 [H]