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The map label for this gene is yeaW [H]

Identifier: 221632156

GI number: 221632156

Start: 128242

End: 129378

Strand: Reverse

Name: yeaW [H]

Synonym: trd_0121

Alternate gene names: 221632156

Gene position: 129378-128242 (Counterclockwise)

Preceding gene: 221632157

Following gene: 221632155

Centisome position: 6.46

GC content: 63.5

Gene sequence:

>1137_bases
GTGAAGGTCGAGAGCATCTCGCTCGTCCCTACTTTGCCGGGCCGCTACTACGTCGATCCGGCGATCTACGCGCGCGAACA
GGAGCGGATTTTCGGCCGCCTCTGGACCTGCATCGGGCTCGCCCAGTCGTTAGCCGAGCCTGGCCAGTATCTCACCACCC
AGCTCGCCGGTGAGCCCTTGCTGGTCATCCGCGGTCACGATGGCGAGTTGCGGGCCTTCCTGAACGTCTGCCGCCATCGC
GGAGCGCGACTCTGCACCGAGTCCCGCGGATGTCTGGAATCGCGCGTGATCCAGTGCCCCTATCATGCCTGGAGTTATGC
CCTCGATGGACGCCTGATCGGCGCACCGAACATGCGGGACGTGCCCGAGTTCTCCCCGGAGCGATATGGGCTCGTGCCCG
TGCCGCTCGCAGTCTGGGAAGGGATGATCTGGGTCAACCTCTCGAACGACCCTCCGCCGGTCGAGTCGCAAATCGTGCCT
CGGATCATCGAGCGACTGGGAGATCGTGCGATCTTCGATCGGTATGGGGTCGGCCAGCTCCGCATCGGGGCAACGCTGAC
CTACGATGTGCAAGCCAACTGGAAGCTCATCGTCGAGAACTTCATGGAGTGTTACCACTGTGCCGTCGTCCACCCGGAGC
TGAGTCGGCTCGTCCCGAGCTTCCGCGCCGGTTACGCCTACCAGGAAGGGGTCGGGGCCACCTTCGCTGAGGGGGTCGAG
ACACTGACACTGACTGGCAAGCGCACGCGCCCGCTCTTGCCTGGCCTGCGCCCCGAGGACGATCGCACCTACTATGGCAT
GGTCCTGGTACCCAACATCTTCGTCAACTTGCATCCGGACTACGTACTCATTCATCGCTTGGAGCCGCTCGACGTCGGAC
GCACATTGGTGCACTGCGACTGGCTGTTCGATCCGGCTATCGTGGCCACTCCGGATTTCGATCCCAGCGATGCGGTCGAG
CTCTGGGATCTCGTCAACCGGCAGGACTGGGCGATGTGCGAGCGGTGCCAGCTGGGCGTCGGCTCGCGGGTCTATGCGGA
AGGAGGCGTCTTCGCACCGATCGAAGCGCATATCCGCCGTTTCAACGATTGGGTACTCACGCAACTCGGCGACGTCGCGA
CTGACTCATCGACCTGA

Upstream 100 bases:

>100_bases
CAGTATACGTAGTGACGGAAGATCTCCCAGTCGTGGCAAAGATGAGGATGGATCCTTCGGTTTCGGCTTCTTGATCGATC
GCGCGCAGCGGAGGTGAGTC

Downstream 100 bases:

>100_bases
GGCAGGCAGTCGAGCGAGAGGAAAGCGGTGAAAGGAGCGACGGGCGATGCCGTCCTACGATGTGCTGATCATCGGTGGTG
GAAACCTCGGACTGTGGACA

Product: rieske 2Fe-2S domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MKVESISLVPTLPGRYYVDPAIYAREQERIFGRLWTCIGLAQSLAEPGQYLTTQLAGEPLLVIRGHDGELRAFLNVCRHR
GARLCTESRGCLESRVIQCPYHAWSYALDGRLIGAPNMRDVPEFSPERYGLVPVPLAVWEGMIWVNLSNDPPPVESQIVP
RIIERLGDRAIFDRYGVGQLRIGATLTYDVQANWKLIVENFMECYHCAVVHPELSRLVPSFRAGYAYQEGVGATFAEGVE
TLTLTGKRTRPLLPGLRPEDDRTYYGMVLVPNIFVNLHPDYVLIHRLEPLDVGRTLVHCDWLFDPAIVATPDFDPSDAVE
LWDLVNRQDWAMCERCQLGVGSRVYAEGGVFAPIEAHIRRFNDWVLTQLGDVATDSST

Sequences:

>Translated_378_residues
MKVESISLVPTLPGRYYVDPAIYAREQERIFGRLWTCIGLAQSLAEPGQYLTTQLAGEPLLVIRGHDGELRAFLNVCRHR
GARLCTESRGCLESRVIQCPYHAWSYALDGRLIGAPNMRDVPEFSPERYGLVPVPLAVWEGMIWVNLSNDPPPVESQIVP
RIIERLGDRAIFDRYGVGQLRIGATLTYDVQANWKLIVENFMECYHCAVVHPELSRLVPSFRAGYAYQEGVGATFAEGVE
TLTLTGKRTRPLLPGLRPEDDRTYYGMVLVPNIFVNLHPDYVLIHRLEPLDVGRTLVHCDWLFDPAIVATPDFDPSDAVE
LWDLVNRQDWAMCERCQLGVGSRVYAEGGVFAPIEAHIRRFNDWVLTQLGDVATDSST
>Mature_378_residues
MKVESISLVPTLPGRYYVDPAIYAREQERIFGRLWTCIGLAQSLAEPGQYLTTQLAGEPLLVIRGHDGELRAFLNVCRHR
GARLCTESRGCLESRVIQCPYHAWSYALDGRLIGAPNMRDVPEFSPERYGLVPVPLAVWEGMIWVNLSNDPPPVESQIVP
RIIERLGDRAIFDRYGVGQLRIGATLTYDVQANWKLIVENFMECYHCAVVHPELSRLVPSFRAGYAYQEGVGATFAEGVE
TLTLTGKRTRPLLPGLRPEDDRTYYGMVLVPNIFVNLHPDYVLIHRLEPLDVGRTLVHCDWLFDPAIVATPDFDPSDAVE
LWDLVNRQDWAMCERCQLGVGSRVYAEGGVFAPIEAHIRRFNDWVLTQLGDVATDSST

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=346, Percent_Identity=30.9248554913295, Blast_Score=164, Evalue=6e-42,
Organism=Escherichia coli, GI1788888, Length=229, Percent_Identity=31.8777292576419, Blast_Score=115, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 42583; Mature: 42583

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00018 EF_HAND_1 ; PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVESISLVPTLPGRYYVDPAIYAREQERIFGRLWTCIGLAQSLAEPGQYLTTQLAGEPL
CCCCCEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCE
LVIRGHDGELRAFLNVCRHRGARLCTESRGCLESRVIQCPYHAWSYALDGRLIGAPNMRD
EEEECCCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHEECCCHHHHEEECCEEECCCCCCC
VPEFSPERYGLVPVPLAVWEGMIWVNLSNDPPPVESQIVPRIIERLGDRAIFDRYGVGQL
CCCCCCCCCCCEECCHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCEE
RIGATLTYDVQANWKLIVENFMECYHCAVVHPELSRLVPSFRAGYAYQEGVGATFAEGVE
EECEEEEEEECCCHHHHHHHHHHHHHHHEECHHHHHHHHHHHCCCCHHCCCCCHHHCCCE
TLTLTGKRTRPLLPGLRPEDDRTYYGMVLVPNIFVNLHPDYVLIHRLEPLDVGRTLVHCD
EEEECCCCCCCCCCCCCCCCCCEEEEEEEECEEEEEECCCEEEEEECCCCCCCCEEEEEE
WLFDPAIVATPDFDPSDAVELWDLVNRQDWAMCERCQLGVGSRVYAEGGVFAPIEAHIRR
EEECCEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCEECHHHHHHHH
FNDWVLTQLGDVATDSST
HHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKVESISLVPTLPGRYYVDPAIYAREQERIFGRLWTCIGLAQSLAEPGQYLTTQLAGEPL
CCCCCEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCE
LVIRGHDGELRAFLNVCRHRGARLCTESRGCLESRVIQCPYHAWSYALDGRLIGAPNMRD
EEEECCCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHEECCCHHHHEEECCEEECCCCCCC
VPEFSPERYGLVPVPLAVWEGMIWVNLSNDPPPVESQIVPRIIERLGDRAIFDRYGVGQL
CCCCCCCCCCCEECCHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCEE
RIGATLTYDVQANWKLIVENFMECYHCAVVHPELSRLVPSFRAGYAYQEGVGATFAEGVE
EECEEEEEEECCCHHHHHHHHHHHHHHHEECHHHHHHHHHHHCCCCHHCCCCCHHHCCCE
TLTLTGKRTRPLLPGLRPEDDRTYYGMVLVPNIFVNLHPDYVLIHRLEPLDVGRTLVHCD
EEEECCCCCCCCCCCCCCCCCCEEEEEEEECEEEEEECCCEEEEEECCCCCCCCEEEEEE
WLFDPAIVATPDFDPSDAVELWDLVNRQDWAMCERCQLGVGSRVYAEGGVFAPIEAHIRR
EEECCEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCEECHHHHHHHH
FNDWVLTQLGDVATDSST
HHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]