| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632157
Identifier: 221632157
GI number: 221632157
Start: 129467
End: 129649
Strand: Reverse
Name: 221632157
Synonym: trd_0122
Alternate gene names: NA
Gene position: 129649-129467 (Counterclockwise)
Preceding gene: 221632158
Following gene: 221632156
Centisome position: 6.47
GC content: 60.11
Gene sequence:
>183_bases GTGCGGGCTGTCACCGATGGGGAGGAGCGCTCGCTGGGACGAGCCGGCTGTCGCCTGACGAGCGTGCCGGTAAAGCGCTT CTCAGCCATACCCCTGTTCGTCCTCGTGCATCTGTACGAAGCTTTTCGACAATCTTTCGACGCTCCGTGGATTGCCAGCA GGGACTCCAATCAGTATACGTAG
Upstream 100 bases:
>100_bases GCTGTCCCCCGCTCGATTGGTCGAGGTGCTTCCGAGAACCGGTACCGTGCTCGCGATTGCCGGCTTCCCTCGGGCTGGGT CCACCGCGCGACGACGAGTG
Downstream 100 bases:
>100_bases TGACGGAAGATCTCCCAGTCGTGGCAAAGATGAGGATGGATCCTTCGGTTTCGGCTTCTTGATCGATCGCGCGCAGCGGA GGTGAGTCGTGAAGGTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 60
Protein sequence:
>60_residues MRAVTDGEERSLGRAGCRLTSVPVKRFSAIPLFVLVHLYEAFRQSFDAPWIASRDSNQYT
Sequences:
>Translated_60_residues MRAVTDGEERSLGRAGCRLTSVPVKRFSAIPLFVLVHLYEAFRQSFDAPWIASRDSNQYT >Mature_60_residues MRAVTDGEERSLGRAGCRLTSVPVKRFSAIPLFVLVHLYEAFRQSFDAPWIASRDSNQYT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6818; Mature: 6818
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVTDGEERSLGRAGCRLTSVPVKRFSAIPLFVLVHLYEAFRQSFDAPWIASRDSNQYT CCCCCCCCHHCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRAVTDGEERSLGRAGCRLTSVPVKRFSAIPLFVLVHLYEAFRQSFDAPWIASRDSNQYT CCCCCCCCHHCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA