Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 221632151

GI number: 221632151

Start: 121514

End: 122800

Strand: Reverse

Name: mmgC [H]

Synonym: trd_0116

Alternate gene names: 221632151

Gene position: 122800-121514 (Counterclockwise)

Preceding gene: 221632152

Following gene: 221632150

Centisome position: 6.13

GC content: 62.78

Gene sequence:

>1287_bases
GTGATGGATGGCGTCCGGGCAGAGGTTCTCGAGTTCGTCGAGGAGACCAAGCGCTACGTCTATGAGGAGCTGATGCCGCT
CGAAGACGAGATCGAGCGGACAGACTACCTTCCCCCGGAGGTCATCGCCGATGTGGCCAAGCGTGGCTACTTCGGCATGA
CGATTCCCAAAGAGTACGGGGGTCTCGGCTTCAACCTGCTCGAAACGTGCATGGTCCTGGAGCAGATCCACAAGGCCCCT
CTGGCTATCGGCTACGTGGTGGACCTCAACAACGGCATCGGCAGCCTGGCCATCCTGCATGGTGGAAGCGAAGAGCTGAA
GCGCGAGTACTTGCCCCGCCTTGCACGTGGGGAGATCATCGGCGTTTTCGCCATGAGCGAGCCGCAGGTCGGGTCGGACG
GCCAGGGCATCTCCACCCGCGCCGAGTGGCGTGACGGCTACTGGGTACTCAACGGCGTCAAGTACTGGATCACCTGGGCA
GAGCGGGGCGATGTCTTCACAGTCGCCGCGGCGACCGATCCCGGCAAGGGTGCTCACGGCGGGATCAGCGTGTTTCTCGT
TCCCAAAGGGACGCCCGGAATGCGGGTCGCGCGTCGACAGAAGATGATGGGCAACGCTGGCATCGACGAGAGCGTCCTCG
TCTTCGAGGATTGCAAGGTTCCAGCAGAAAACCTGTTGGGTGAACTCGGTTGGGGCTTCCGGCTGCTCATGCGCACGCTC
GACGAAGGGCGCGTCAAGTGCTGCTCGCTCGCGATCGGCTATGCCGAGCGCGCCTGGGAACTCGCTATGGCCTATGTGAA
GCGGCGGCAGGCCTTCGGTCAGCGGCTGGCTGACTTTCAGGGCATCCAATGGCAGCTCGCGGAAGCTGCGACGACGATCT
GGCTCTCTCGCCTGGCCATGTACGAGGCAGCGCGCAAGATCGATCGCGGCGAGTTCGCCGCCAAGGAAGCAGCGATGGCC
AAGCTCTACTCCACGGAAGCGTGCCAGCACGTCGTCGATACGGCAGTGCAACTCTTCGGTGCGCGCGGCTATTGCCGGGA
TTACCCGCTCGAGCGCATCTACCGCAACTATCGGAGTCTCCGCATCGTGGAAGGAACCAGCGAGATCCAGCGGCGCATCA
TCTGGAAGCAGATGTCCAAGCTCTACGATCCGGAGCGCGCACCAGATGAACGGACACGCGAACACGCGATCCGCGTCGAG
CGCATGCTCGAGCGCGCGTTAGCAGTCGATCGCCCCTATCAGGATTGGGGCTTCCGGTATCTTGACGAGGTGGCAGCTGA
CGACTGA

Upstream 100 bases:

>100_bases
AGGTCGCGGAAGTGAATCCGCTCATCGTGCTCGAGGAAGGACGAGGTGCGTGGGCAGTCGACAGTCTGATCGTTCTGCGT
GCTCCGGAAAGGAGGGATGG

Downstream 100 bases:

>100_bases
GAGCGTTCTCGCTCGCCGTGCGCTTTCGAGCGAATCGTCGCCGGATGGCACGGGAGGCGTGCATCGCTGATCGCGCCTCC
CGTGTTCGCTGCTCTCACGG

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MMDGVRAEVLEFVEETKRYVYEELMPLEDEIERTDYLPPEVIADVAKRGYFGMTIPKEYGGLGFNLLETCMVLEQIHKAP
LAIGYVVDLNNGIGSLAILHGGSEELKREYLPRLARGEIIGVFAMSEPQVGSDGQGISTRAEWRDGYWVLNGVKYWITWA
ERGDVFTVAAATDPGKGAHGGISVFLVPKGTPGMRVARRQKMMGNAGIDESVLVFEDCKVPAENLLGELGWGFRLLMRTL
DEGRVKCCSLAIGYAERAWELAMAYVKRRQAFGQRLADFQGIQWQLAEAATTIWLSRLAMYEAARKIDRGEFAAKEAAMA
KLYSTEACQHVVDTAVQLFGARGYCRDYPLERIYRNYRSLRIVEGTSEIQRRIIWKQMSKLYDPERAPDERTREHAIRVE
RMLERALAVDRPYQDWGFRYLDEVAADD

Sequences:

>Translated_428_residues
MMDGVRAEVLEFVEETKRYVYEELMPLEDEIERTDYLPPEVIADVAKRGYFGMTIPKEYGGLGFNLLETCMVLEQIHKAP
LAIGYVVDLNNGIGSLAILHGGSEELKREYLPRLARGEIIGVFAMSEPQVGSDGQGISTRAEWRDGYWVLNGVKYWITWA
ERGDVFTVAAATDPGKGAHGGISVFLVPKGTPGMRVARRQKMMGNAGIDESVLVFEDCKVPAENLLGELGWGFRLLMRTL
DEGRVKCCSLAIGYAERAWELAMAYVKRRQAFGQRLADFQGIQWQLAEAATTIWLSRLAMYEAARKIDRGEFAAKEAAMA
KLYSTEACQHVVDTAVQLFGARGYCRDYPLERIYRNYRSLRIVEGTSEIQRRIIWKQMSKLYDPERAPDERTREHAIRVE
RMLERALAVDRPYQDWGFRYLDEVAADD
>Mature_428_residues
MMDGVRAEVLEFVEETKRYVYEELMPLEDEIERTDYLPPEVIADVAKRGYFGMTIPKEYGGLGFNLLETCMVLEQIHKAP
LAIGYVVDLNNGIGSLAILHGGSEELKREYLPRLARGEIIGVFAMSEPQVGSDGQGISTRAEWRDGYWVLNGVKYWITWA
ERGDVFTVAAATDPGKGAHGGISVFLVPKGTPGMRVARRQKMMGNAGIDESVLVFEDCKVPAENLLGELGWGFRLLMRTL
DEGRVKCCSLAIGYAERAWELAMAYVKRRQAFGQRLADFQGIQWQLAEAATTIWLSRLAMYEAARKIDRGEFAAKEAAMA
KLYSTEACQHVVDTAVQLFGARGYCRDYPLERIYRNYRSLRIVEGTSEIQRRIIWKQMSKLYDPERAPDERTREHAIRVE
RMLERALAVDRPYQDWGFRYLDEVAADD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=371, Percent_Identity=36.6576819407008, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI4501859, Length=366, Percent_Identity=35.2459016393443, Blast_Score=248, Evalue=8e-66,
Organism=Homo sapiens, GI226958412, Length=381, Percent_Identity=33.5958005249344, Blast_Score=232, Evalue=5e-61,
Organism=Homo sapiens, GI226958414, Length=360, Percent_Identity=34.4444444444444, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI4557231, Length=374, Percent_Identity=31.0160427807487, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI187960098, Length=374, Percent_Identity=31.0160427807487, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI21361497, Length=375, Percent_Identity=34.9333333333333, Blast_Score=212, Evalue=4e-55,
Organism=Homo sapiens, GI4501857, Length=375, Percent_Identity=34.1333333333333, Blast_Score=195, Evalue=5e-50,
Organism=Homo sapiens, GI7656849, Length=376, Percent_Identity=29.5212765957447, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI4557235, Length=378, Percent_Identity=30.952380952381, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI76496475, Length=378, Percent_Identity=30.952380952381, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI48976061, Length=397, Percent_Identity=29.7229219143577, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI211971008, Length=397, Percent_Identity=29.7229219143577, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI38505218, Length=291, Percent_Identity=31.9587628865979, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI4503943, Length=373, Percent_Identity=28.1501340482574, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI7669494, Length=356, Percent_Identity=28.3707865168539, Blast_Score=120, Evalue=3e-27,
Organism=Escherichia coli, GI87081958, Length=345, Percent_Identity=27.2463768115942, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1786223, Length=369, Percent_Identity=26.5582655826558, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI87081702, Length=359, Percent_Identity=30.08356545961, Blast_Score=119, Evalue=5e-28,
Organism=Escherichia coli, GI87082384, Length=285, Percent_Identity=30.5263157894737, Blast_Score=83, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17538396, Length=384, Percent_Identity=35.4166666666667, Blast_Score=239, Evalue=1e-63,
Organism=Caenorhabditis elegans, GI17570075, Length=376, Percent_Identity=32.4468085106383, Blast_Score=238, Evalue=5e-63,
Organism=Caenorhabditis elegans, GI17533517, Length=376, Percent_Identity=31.1170212765957, Blast_Score=217, Evalue=9e-57,
Organism=Caenorhabditis elegans, GI17508101, Length=364, Percent_Identity=32.4175824175824, Blast_Score=215, Evalue=4e-56,
Organism=Caenorhabditis elegans, GI17506239, Length=374, Percent_Identity=32.3529411764706, Blast_Score=212, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17569725, Length=370, Percent_Identity=31.0810810810811, Blast_Score=211, Evalue=6e-55,
Organism=Caenorhabditis elegans, GI17534899, Length=363, Percent_Identity=31.129476584022, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI71985184, Length=382, Percent_Identity=33.5078534031414, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI71990804, Length=295, Percent_Identity=34.5762711864407, Blast_Score=193, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI71985192, Length=330, Percent_Identity=33.030303030303, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17551932, Length=365, Percent_Identity=27.3972602739726, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI17505929, Length=365, Percent_Identity=26.5753424657534, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI32563615, Length=232, Percent_Identity=32.3275862068966, Blast_Score=132, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI71982178, Length=269, Percent_Identity=28.2527881040892, Blast_Score=131, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI17534353, Length=370, Percent_Identity=26.4864864864865, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17562446, Length=284, Percent_Identity=30.9859154929577, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI21356377, Length=377, Percent_Identity=36.0742705570292, Blast_Score=241, Evalue=8e-64,
Organism=Drosophila melanogaster, GI24646207, Length=369, Percent_Identity=36.0433604336043, Blast_Score=226, Evalue=2e-59,
Organism=Drosophila melanogaster, GI24666513, Length=369, Percent_Identity=33.6043360433604, Blast_Score=222, Evalue=4e-58,
Organism=Drosophila melanogaster, GI24660351, Length=371, Percent_Identity=32.3450134770889, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI21355753, Length=370, Percent_Identity=33.7837837837838, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI281363737, Length=333, Percent_Identity=33.6336336336336, Blast_Score=185, Evalue=5e-47,
Organism=Drosophila melanogaster, GI19920834, Length=368, Percent_Identity=29.3478260869565, Blast_Score=136, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 48569; Mature: 48569

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDGVRAEVLEFVEETKRYVYEELMPLEDEIERTDYLPPEVIADVAKRGYFGMTIPKEYG
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHC
GLGFNLLETCMVLEQIHKAPLAIGYVVDLNNGIGSLAILHGGSEELKREYLPRLARGEII
CCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCEEEEEECCHHHHHHHHCCHHHCCCEE
GVFAMSEPQVGSDGQGISTRAEWRDGYWVLNGVKYWITWAERGDVFTVAAATDPGKGAHG
EEEEECCCCCCCCCCCCCCCCCCCCCEEEEECEEEEEEEECCCCEEEEEEECCCCCCCCC
GISVFLVPKGTPGMRVARRQKMMGNAGIDESVLVFEDCKVPAENLLGELGWGFRLLMRTL
CEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCHHHHHHHHHH
DEGRVKCCSLAIGYAERAWELAMAYVKRRQAFGQRLADFQGIQWQLAEAATTIWLSRLAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
YEAARKIDRGEFAAKEAAMAKLYSTEACQHVVDTAVQLFGARGYCRDYPLERIYRNYRSL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCE
RIVEGTSEIQRRIIWKQMSKLYDPERAPDERTREHAIRVERMLERALAVDRPYQDWGFRY
EEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LDEVAADD
HHHHHCCC
>Mature Secondary Structure
MMDGVRAEVLEFVEETKRYVYEELMPLEDEIERTDYLPPEVIADVAKRGYFGMTIPKEYG
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHC
GLGFNLLETCMVLEQIHKAPLAIGYVVDLNNGIGSLAILHGGSEELKREYLPRLARGEII
CCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCEEEEEECCHHHHHHHHCCHHHCCCEE
GVFAMSEPQVGSDGQGISTRAEWRDGYWVLNGVKYWITWAERGDVFTVAAATDPGKGAHG
EEEEECCCCCCCCCCCCCCCCCCCCCEEEEECEEEEEEEECCCCEEEEEEECCCCCCCCC
GISVFLVPKGTPGMRVARRQKMMGNAGIDESVLVFEDCKVPAENLLGELGWGFRLLMRTL
CEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCHHHHHHHHHH
DEGRVKCCSLAIGYAERAWELAMAYVKRRQAFGQRLADFQGIQWQLAEAATTIWLSRLAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
YEAARKIDRGEFAAKEAAMAKLYSTEACQHVVDTAVQLFGARGYCRDYPLERIYRNYRSL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCE
RIVEGTSEIQRRIIWKQMSKLYDPERAPDERTREHAIRVERMLERALAVDRPYQDWGFRY
EEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LDEVAADD
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]