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The map label for this gene is 221632127

Identifier: 221632127

GI number: 221632127

Start: 102971

End: 103480

Strand: Reverse

Name: 221632127

Synonym: trd_0092

Alternate gene names: NA

Gene position: 103480-102971 (Counterclockwise)

Preceding gene: 221632128

Following gene: 221632126

Centisome position: 5.17

GC content: 64.51

Gene sequence:

>510_bases
ATGAAATCAGCAAGACACGTTGCGGTCTGCGGCCCGCACGAGGCGACACCGGAGGAACAGGCACTGGCCGAACGCCTGGG
AGAACTCCTGGCCGTTTCTGGTCTGACGGTTGTCTGCGGCGGTCGCGGTGGGGTCATGGCGGCCGTGTGTCGGGGCGCCA
AACGCAGAGGGGGTCAGACGATCGGTATCCTACCTGGCACCGATCCGTCAGACGCCAACGAATGGGTCGACCATCCGATC
TGTACTGGTTTGGGTGAGGCACGCAACGTTGTCGTCGTCGCTTCCGGGCGCGTGGTCATCGCGGTCGGCGGCGGACTTGG
TACGCTCTCCGAGATCGCATTGGCACTCAAGTTGGGGCGCCCAGTGATCGCCCTGCGCTCCTGGCCGCTCGATGCCTCTC
TACTCTCACGGGCTGGCGCCACGATCAGCGAGGTCGCCACACCAGAGGAAGCAGTCAACCAGGTCCTCGCTGTCCTCAGC
GTTCAACCCACCGGAGGAGCAGAGCTGTGA

Upstream 100 bases:

>100_bases
TGCCGCCGCTCCCGTTCACCGTCGACCGGCTGACGTTGTATCGGAGCGAGCTCTTCCGTTCCGGGCCTCGCTACACCATC
ATTGAGGAGTTCCTGCTCCG

Downstream 100 bases:

>100_bases
CGACTCAGACGGTATCCGTACTCGACAAACTCGCCGAACTCGAGCAGCGCTTCGATGAGGTGGAACGACAGCTCGCCGAT
CCGGACGTCGCCACCGATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MKSARHVAVCGPHEATPEEQALAERLGELLAVSGLTVVCGGRGGVMAAVCRGAKRRGGQTIGILPGTDPSDANEWVDHPI
CTGLGEARNVVVVASGRVVIAVGGGLGTLSEIALALKLGRPVIALRSWPLDASLLSRAGATISEVATPEEAVNQVLAVLS
VQPTGGAEL

Sequences:

>Translated_169_residues
MKSARHVAVCGPHEATPEEQALAERLGELLAVSGLTVVCGGRGGVMAAVCRGAKRRGGQTIGILPGTDPSDANEWVDHPI
CTGLGEARNVVVVASGRVVIAVGGGLGTLSEIALALKLGRPVIALRSWPLDASLLSRAGATISEVATPEEAVNQVLAVLS
VQPTGGAEL
>Mature_169_residues
MKSARHVAVCGPHEATPEEQALAERLGELLAVSGLTVVCGGRGGVMAAVCRGAKRRGGQTIGILPGTDPSDANEWVDHPI
CTGLGEARNVVVVASGRVVIAVGGGLGTLSEIALALKLGRPVIALRSWPLDASLLSRAGATISEVATPEEAVNQVLAVLS
VQPTGGAEL

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005268
- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 17070; Mature: 17070

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSARHVAVCGPHEATPEEQALAERLGELLAVSGLTVVCGGRGGVMAAVCRGAKRRGGQT
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCE
IGILPGTDPSDANEWVDHPICTGLGEARNVVVVASGRVVIAVGGGLGTLSEIALALKLGR
EEEECCCCCCCCHHHHCCCHHCCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHCCC
PVIALRSWPLDASLLSRAGATISEVATPEEAVNQVLAVLSVQPTGGAEL
CEEEEECCCCCHHHHHHCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKSARHVAVCGPHEATPEEQALAERLGELLAVSGLTVVCGGRGGVMAAVCRGAKRRGGQT
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCE
IGILPGTDPSDANEWVDHPICTGLGEARNVVVVASGRVVIAVGGGLGTLSEIALALKLGR
EEEECCCCCCCCHHHHCCCHHCCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHCCC
PVIALRSWPLDASLLSRAGATISEVATPEEAVNQVLAVLSVQPTGGAEL
CEEEEECCCCCHHHHHHCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]