| Definition | Streptococcus pneumoniae ATCC 700669, complete genome. |
|---|---|
| Accession | NC_011900 |
| Length | 2,221,315 |
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The map label for this gene is aga [H]
Identifier: 221232634
GI number: 221232634
Start: 1860685
End: 1862847
Strand: Reverse
Name: aga [H]
Synonym: SPN23F_19170
Alternate gene names: 221232634
Gene position: 1862847-1860685 (Counterclockwise)
Preceding gene: 221232637
Following gene: 221232633
Centisome position: 83.86
GC content: 37.26
Gene sequence:
>2163_bases ATGGGAGTTAGGATAGAGAATAATCTATTTTATGTTGAGAGTAAAAATCTAAGTTTGATTATTGAAAATCGAAATGGCTA CTTACTTTTGAAACATTTAGGAAAGACTATTAAGAACTATAAAGGTTCCAATAGTGTTTATGAACGAGACCATGCCTTTT CAGGAAATCCAACGGCTACTAATCGAACCTTTAGTTTAGATACTCAACGTCAAATTTTTGGACAACATGGCTTAGGAGAT TTTAGGAAACCAACCATACAGGTTCAGCATAATGTAACTGAAGTAACAGACTTTCGATTTGTAGAAGCAAAGATTTTAAA AGGTCAGAATGGTCCACAGGGCTTACCTTCTCCACATAGCATGGACGATACAGAGACTCTTGTCTTAATGTTAGAAGATT CTAAGGCTCAACTTAGTCTGACTTTGTATTATACTACTTTTAATAATGATGCGACTATTGCTAGCTACAGTAAATTAGAT AATAATAGTAATCAGGAAGTTGTCATCCATAAAGATTTTTCTTTTATGGCTGATTTTCCAGCTGCAGATTATGAAATAGC AACTCTGCAGGGTGCTTATGCTCGTGAAAAGACTGTTAGACGTCAACAGGTAGAACAAGGAATCTTTTCGATTAGTTCAA ACCGAGGTGCTTCTGGTCATGCTCAAACACCAGCTCTTCTACTATGCGAACAAGGAGTCACAGAGGATGCTGGGAATGTG TTTGCTATTCAACTAATGTATAGTGGCAACTTTGAAGCTTTTGTTCAAAAAAATCAATTGAATGAAGTTCGGGTGGCTAT TGGCATTAATCCAGAAAACTTTTCTTGGAAGTTAGCCCCTGAGGAATACTTTGAAACACCGGTAGCTTTAGTGACTCATT CAGATCAGGGATTAACTGGTATTAGTCATGAAAGTCAGAATTTTGTACTGAAGCACATTATGCTAAGTGAATTTTCTAAA AAAGAACGTCCAATTCTAATCAATAACTGGGAAGCTACTTACTTTGACTTTCAGAGAGAAAAACTGTTAGAGTTAGCAGA TGAAGCTAAGAAAGTTGGCATTGAACTTTTTGTATTAGATGATGGTTGGTTTGGCAATCGTTTTGATGATAATCGTGCTT TAGGTGATTGGGTTGTTAATGAGGAAAAACTGGGTGGAAGTCTAGAAAGTCTGATTTCAGCTATCCATGAAAGAGGTTTG CAGTTTGGACTTTGGTTAGAACCCGAAATGATTTCTGTAGATAGTGATTTGTATCGTCAACATCCTGACTGGGCTATTCA GGTTCCTGATTATGAGCATACTTATTCTCGGAATCAATTAGTACTTAATCTTGCCAATCCTCAGGTAGTAGAATACTTGA AAAGTGTCTTAGATCAACTCCTATCTTATCATGAGATTGATTACATTAAATGGGATATGAACCGCAATATCACTAAGCTA GGGAATGGATTAACTTATCTAGAGACACAGATGCAATCTCATCAGTACATGCTGGGGCTTTACGAACTCGTTTCTTATCT GACAGAGAAGCACAGCCATATTCTCTTTGAGTCCTGCTCTGGTGGTGGTGGACGAAATGATCTTGGTATGATACGCTATT TCCCACAAGTCTGGGCTAGTGATAATACTGATGCCATTGCACGTTTACCAATTCAATACGGTTCATCCTATCTCTATCCA ACCATTTCTATGGGGGCTCATGTGTCAGCAGTACCGAATCATCAGATGGGACGAATGACACCATTAGAAACACGTGGCCA TGTAGCAATGATGGGAAATTTGGGCTATGAGCTTGATTTGACAAATTTATCAGATGAAGAGAAAGCTACGATTGCTAATC AGGTGAACTTGTATAAAGAATTACGACCAGTAGTTCAGTTAGGACAGCAGTATAGACTAATTAATCCTGATACTGCATCC AATGAAGCAGCTGTACAATTTAATTACGGAAATCAAACGATTGTAACCTACGTTCGCGTTTTATCTGTTGTAGAGACCAT GGAAACAACTTTAAAATTAAAAGATTTGGATGAAGAGGGACTATATAAATTACAGGAAAATGGCGAAGTTTACTCAGGTG CAGAACTAATGTATGCGGGCTTAACTGTTATCTTATCCCAAGGAGATTTTTTGAGTAGACAGTATATTTTTAGAAAACTA TGA
Upstream 100 bases:
>100_bases CTCCTACCTAACATTTTACCATATTCTTGAGACATTTTTCTATTTTGGAAAGCGATTTCAGGTGATAAAATATAATCAAT AAAGTGATGAGGTGAAGTAA
Downstream 100 bases:
>100_bases TATGTACTGACCCCAAAAGTTAGATTTATTCTGTCTAACTTTTGGGGTGCAGTTCAATAAGGGTGTATAAATTTATAAAG GAGGCTTTCTAATGGAATGG
Product: alpha-galactosidase
Products: NA
Alternate protein names: Melibiase [H]
Number of amino acids: Translated: 720; Mature: 719
Protein sequence:
>720_residues MGVRIENNLFYVESKNLSLIIENRNGYLLLKHLGKTIKNYKGSNSVYERDHAFSGNPTATNRTFSLDTQRQIFGQHGLGD FRKPTIQVQHNVTEVTDFRFVEAKILKGQNGPQGLPSPHSMDDTETLVLMLEDSKAQLSLTLYYTTFNNDATIASYSKLD NNSNQEVVIHKDFSFMADFPAADYEIATLQGAYAREKTVRRQQVEQGIFSISSNRGASGHAQTPALLLCEQGVTEDAGNV FAIQLMYSGNFEAFVQKNQLNEVRVAIGINPENFSWKLAPEEYFETPVALVTHSDQGLTGISHESQNFVLKHIMLSEFSK KERPILINNWEATYFDFQREKLLELADEAKKVGIELFVLDDGWFGNRFDDNRALGDWVVNEEKLGGSLESLISAIHERGL QFGLWLEPEMISVDSDLYRQHPDWAIQVPDYEHTYSRNQLVLNLANPQVVEYLKSVLDQLLSYHEIDYIKWDMNRNITKL GNGLTYLETQMQSHQYMLGLYELVSYLTEKHSHILFESCSGGGGRNDLGMIRYFPQVWASDNTDAIARLPIQYGSSYLYP TISMGAHVSAVPNHQMGRMTPLETRGHVAMMGNLGYELDLTNLSDEEKATIANQVNLYKELRPVVQLGQQYRLINPDTAS NEAAVQFNYGNQTIVTYVRVLSVVETMETTLKLKDLDEEGLYKLQENGEVYSGAELMYAGLTVILSQGDFLSRQYIFRKL
Sequences:
>Translated_720_residues MGVRIENNLFYVESKNLSLIIENRNGYLLLKHLGKTIKNYKGSNSVYERDHAFSGNPTATNRTFSLDTQRQIFGQHGLGD FRKPTIQVQHNVTEVTDFRFVEAKILKGQNGPQGLPSPHSMDDTETLVLMLEDSKAQLSLTLYYTTFNNDATIASYSKLD NNSNQEVVIHKDFSFMADFPAADYEIATLQGAYAREKTVRRQQVEQGIFSISSNRGASGHAQTPALLLCEQGVTEDAGNV FAIQLMYSGNFEAFVQKNQLNEVRVAIGINPENFSWKLAPEEYFETPVALVTHSDQGLTGISHESQNFVLKHIMLSEFSK KERPILINNWEATYFDFQREKLLELADEAKKVGIELFVLDDGWFGNRFDDNRALGDWVVNEEKLGGSLESLISAIHERGL QFGLWLEPEMISVDSDLYRQHPDWAIQVPDYEHTYSRNQLVLNLANPQVVEYLKSVLDQLLSYHEIDYIKWDMNRNITKL GNGLTYLETQMQSHQYMLGLYELVSYLTEKHSHILFESCSGGGGRNDLGMIRYFPQVWASDNTDAIARLPIQYGSSYLYP TISMGAHVSAVPNHQMGRMTPLETRGHVAMMGNLGYELDLTNLSDEEKATIANQVNLYKELRPVVQLGQQYRLINPDTAS NEAAVQFNYGNQTIVTYVRVLSVVETMETTLKLKDLDEEGLYKLQENGEVYSGAELMYAGLTVILSQGDFLSRQYIFRKL >Mature_719_residues GVRIENNLFYVESKNLSLIIENRNGYLLLKHLGKTIKNYKGSNSVYERDHAFSGNPTATNRTFSLDTQRQIFGQHGLGDF RKPTIQVQHNVTEVTDFRFVEAKILKGQNGPQGLPSPHSMDDTETLVLMLEDSKAQLSLTLYYTTFNNDATIASYSKLDN NSNQEVVIHKDFSFMADFPAADYEIATLQGAYAREKTVRRQQVEQGIFSISSNRGASGHAQTPALLLCEQGVTEDAGNVF AIQLMYSGNFEAFVQKNQLNEVRVAIGINPENFSWKLAPEEYFETPVALVTHSDQGLTGISHESQNFVLKHIMLSEFSKK ERPILINNWEATYFDFQREKLLELADEAKKVGIELFVLDDGWFGNRFDDNRALGDWVVNEEKLGGSLESLISAIHERGLQ FGLWLEPEMISVDSDLYRQHPDWAIQVPDYEHTYSRNQLVLNLANPQVVEYLKSVLDQLLSYHEIDYIKWDMNRNITKLG NGLTYLETQMQSHQYMLGLYELVSYLTEKHSHILFESCSGGGGRNDLGMIRYFPQVWASDNTDAIARLPIQYGSSYLYPT ISMGAHVSAVPNHQMGRMTPLETRGHVAMMGNLGYELDLTNLSDEEKATIANQVNLYKELRPVVQLGQQYRLINPDTASN EAAVQFNYGNQTIVTYVRVLSVVETMETTLKLKDLDEEGLYKLQENGEVYSGAELMYAGLTVILSQGDFLSRQYIFRKL
Specific function: Unknown
COG id: COG3345
COG function: function code G; Alpha-galactosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 36 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR002252 - InterPro: IPR017853 - InterPro: IPR000111 [H]
Pfam domain/function: PF02065 Melibiase [H]
EC number: =3.2.1.22 [H]
Molecular weight: Translated: 81707; Mature: 81576
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00512 ALPHA_GALACTOSIDASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVRIENNLFYVESKNLSLIIENRNGYLLLKHLGKTIKNYKGSNSVYERDHAFSGNPTAT CCEEEECCEEEEECCCEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC NRTFSLDTQRQIFGQHGLGDFRKPTIQVQHNVTEVTDFRFVEAKILKGQNGPQGLPSPHS CEEEECCHHHHHHCCCCCCCCCCCEEEEECCCCHHHCEEEEEEEEECCCCCCCCCCCCCC MDDTETLVLMLEDSKAQLSLTLYYTTFNNDATIASYSKLDNNSNQEVVIHKDFSFMADFP CCCCCEEEEEEECCCCEEEEEEEEEEECCCCEEEEHHHCCCCCCCEEEEECCCHHEECCC AADYEIATLQGAYAREKTVRRQQVEQGIFSISSNRGASGHAQTPALLLCEQGVTEDAGNV CCCEEEEEECCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEECCCCCCCCCCE FAIQLMYSGNFEAFVQKNQLNEVRVAIGINPENFSWKLAPEEYFETPVALVTHSDQGLTG EEEEEEECCCEEEEEECCCCCEEEEEEEECCCCCEEEECCHHHHCCCEEEEEECCCCCCC ISHESQNFVLKHIMLSEFSKKERPILINNWEATYFDFQREKLLELADEAKKVGIELFVLD CCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHCCEEEEEEE DGWFGNRFDDNRALGDWVVNEEKLGGSLESLISAIHERGLQFGLWLEPEMISVDSDLYRQ CCCCCCCCCCCCCCCCCEECHHHCCCHHHHHHHHHHHCCCEEEEEECCCEEECCHHHHHC HPDWAIQVPDYEHTYSRNQLVLNLANPQVVEYLKSVLDQLLSYHEIDYIKWDMNRNITKL CCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH GNGLTYLETQMQSHQYMLGLYELVSYLTEKHSHILFESCSGGGGRNDLGMIRYFPQVWAS CCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCC DNTDAIARLPIQYGSSYLYPTISMGAHVSAVPNHQMGRMTPLETRGHVAMMGNLGYELDL CCCCCEEEEEHHHCCCEECEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEE TNLSDEEKATIANQVNLYKELRPVVQLGQQYRLINPDTASNEAAVQFNYGNQTIVTYVRV CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHH LSVVETMETTLKLKDLDEEGLYKLQENGEVYSGAELMYAGLTVILSQGDFLSRQYIFRKL HHHHHHHHHHEEEECCCHHHCEEECCCCCEECCCHHHHCCEEEEEECCCHHHHHHHHHCC >Mature Secondary Structure GVRIENNLFYVESKNLSLIIENRNGYLLLKHLGKTIKNYKGSNSVYERDHAFSGNPTAT CEEEECCEEEEECCCEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC NRTFSLDTQRQIFGQHGLGDFRKPTIQVQHNVTEVTDFRFVEAKILKGQNGPQGLPSPHS CEEEECCHHHHHHCCCCCCCCCCCEEEEECCCCHHHCEEEEEEEEECCCCCCCCCCCCCC MDDTETLVLMLEDSKAQLSLTLYYTTFNNDATIASYSKLDNNSNQEVVIHKDFSFMADFP CCCCCEEEEEEECCCCEEEEEEEEEEECCCCEEEEHHHCCCCCCCEEEEECCCHHEECCC AADYEIATLQGAYAREKTVRRQQVEQGIFSISSNRGASGHAQTPALLLCEQGVTEDAGNV CCCEEEEEECCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEECCCCCCCCCCE FAIQLMYSGNFEAFVQKNQLNEVRVAIGINPENFSWKLAPEEYFETPVALVTHSDQGLTG EEEEEEECCCEEEEEECCCCCEEEEEEEECCCCCEEEECCHHHHCCCEEEEEECCCCCCC ISHESQNFVLKHIMLSEFSKKERPILINNWEATYFDFQREKLLELADEAKKVGIELFVLD CCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHCCEEEEEEE DGWFGNRFDDNRALGDWVVNEEKLGGSLESLISAIHERGLQFGLWLEPEMISVDSDLYRQ CCCCCCCCCCCCCCCCCEECHHHCCCHHHHHHHHHHHCCCEEEEEECCCEEECCHHHHHC HPDWAIQVPDYEHTYSRNQLVLNLANPQVVEYLKSVLDQLLSYHEIDYIKWDMNRNITKL CCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH GNGLTYLETQMQSHQYMLGLYELVSYLTEKHSHILFESCSGGGGRNDLGMIRYFPQVWAS CCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCC DNTDAIARLPIQYGSSYLYPTISMGAHVSAVPNHQMGRMTPLETRGHVAMMGNLGYELDL CCCCCEEEEEHHHCCCEECEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEE TNLSDEEKATIANQVNLYKELRPVVQLGQQYRLINPDTASNEAAVQFNYGNQTIVTYVRV CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHH LSVVETMETTLKLKDLDEEGLYKLQENGEVYSGAELMYAGLTVILSQGDFLSRQYIFRKL HHHHHHHHHHEEEECCCHHHCEEECCCCCEECCCHHHHCCEEEEEECCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1649890; 1660918; 12397186 [H]