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The map label for this gene is msmE [H]

Identifier: 221232633

GI number: 221232633

Start: 1859334

End: 1860593

Strand: Reverse

Name: msmE [H]

Synonym: SPN23F_19160

Alternate gene names: 221232633

Gene position: 1860593-1859334 (Counterclockwise)

Preceding gene: 221232634

Following gene: 221232632

Centisome position: 83.76

GC content: 42.94

Gene sequence:

>1260_bases
ATGGAATGGTATAAAAAAATCGGACTTCTTGCAACTACAGGTTTAGCTTTGTTTGGGCTCGGCGCTTGCTCCAACTATGG
TAAATCTGCGGATGGCACAGTGACCATCGAGTATTTCAACCAGAAAAAAGAAATGACCAAAACCTTGGAAGAAATCACTC
GTGATTTTGAGAAGGAAAACCCTAAGATCAAGGTCAAAGTCGTCAATGTACCAAATGCTGGTGAAGTATTGAAGACACGC
GTTCTCGCAGGAGATGTGCCTGATGTGGTCAATATTTACCCACAGTCCATCGAACTGCAAGAATGGGCAAAAGCAGGTGT
TTTTGAAGATTTGAGCAACAAAGACTACCTGAAACGCGTGAAAAATGCCTACGCTGAAAAATATGCTGTAAACGAAAAAG
TTTATAACGTTCCTTTTACAGCTAATGCTTATGGAATTTACTACAACAAAGATAAATTCGAAGAACTGGGCTTGAAGGTT
CCTGAAACCTGGGATGAATTTGAACAGTTAGTCAAAGATATCGTTGCTAAAGGACAAACATCATTTGGAATTGCAGGTGC
AGATGCTTGGACACTCAATGGTTACAATCAATTAGCCTTTGCGACAGCAACAGGTGGAGGAAAAGAAGCAAATCAATACC
TTCGTTATTCTCAACCAAATGCCATTAAATTGTCGGATCCGATTATGAAAGATGATATCAAGGTCATGGACATCCTTCGC
ATCAATGGCTCTAAGCAAAAGAACTGGGAAGGTGCTGGCTATACCGATGTTATCGGAGCCTTCGCACGTGGGGATGTCCT
CATGACACCAAATGGGTCTTGGGCGATCACAGCGATTAATGAACAAAAACCGAACTTTAAGATTGGAACCTTCATGATTC
CAGGAAAAGAAAAAGGACAAAGCTTAACCGTTGGTGCGGGAGACTTGGCATGGTCTATCTCAGCCACCACCAAACATCCA
AAAGAAGCCAATGCCTTTGTGGAATATATGACCCGTCCAGAAGTCATGCAAAAATACTACGATGTGGACGGATCTCCAAC
AGCGATCGAAGGGGTCAAACAAGCAGGAGAAGATTCACCGCTTGCTGGTATGACCGAATATGCCTTTACGGATCGTCACT
TGGTCTGGTTGCAACAATACTGGACCAGTGAAGCAGACTTCCATACCTTGACCATGAACTATGTCTTGACCGGTGATAAA
CAAGGCATGGTCAATGATTTGAATGCCTTCTTTAACCCGATGAAAGCGGATGTGGATTAG

Upstream 100 bases:

>100_bases
AAACTATGATATGTACTGACCCCAAAAGTTAGATTTATTCTGTCTAACTTTTGGGGTGCAGTTCAATAAGGGTGTATAAA
TTTATAAAGGAGGCTTTCTA

Downstream 100 bases:

>100_bases
GAGTAGAGAGACTATGAAAAAAGTATTACAAAAATATTGGGCATGGGCTTTTGTGGTCATCCCCCTCTTGTTACAAGCAA
TTTTCTTCTATGTGCCGATG

Product: multiple sugar-binding protein precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MEWYKKIGLLATTGLALFGLGACSNYGKSADGTVTIEYFNQKKEMTKTLEEITRDFEKENPKIKVKVVNVPNAGEVLKTR
VLAGDVPDVVNIYPQSIELQEWAKAGVFEDLSNKDYLKRVKNAYAEKYAVNEKVYNVPFTANAYGIYYNKDKFEELGLKV
PETWDEFEQLVKDIVAKGQTSFGIAGADAWTLNGYNQLAFATATGGGKEANQYLRYSQPNAIKLSDPIMKDDIKVMDILR
INGSKQKNWEGAGYTDVIGAFARGDVLMTPNGSWAITAINEQKPNFKIGTFMIPGKEKGQSLTVGAGDLAWSISATTKHP
KEANAFVEYMTRPEVMQKYYDVDGSPTAIEGVKQAGEDSPLAGMTEYAFTDRHLVWLQQYWTSEADFHTLTMNYVLTGDK
QGMVNDLNAFFNPMKADVD

Sequences:

>Translated_419_residues
MEWYKKIGLLATTGLALFGLGACSNYGKSADGTVTIEYFNQKKEMTKTLEEITRDFEKENPKIKVKVVNVPNAGEVLKTR
VLAGDVPDVVNIYPQSIELQEWAKAGVFEDLSNKDYLKRVKNAYAEKYAVNEKVYNVPFTANAYGIYYNKDKFEELGLKV
PETWDEFEQLVKDIVAKGQTSFGIAGADAWTLNGYNQLAFATATGGGKEANQYLRYSQPNAIKLSDPIMKDDIKVMDILR
INGSKQKNWEGAGYTDVIGAFARGDVLMTPNGSWAITAINEQKPNFKIGTFMIPGKEKGQSLTVGAGDLAWSISATTKHP
KEANAFVEYMTRPEVMQKYYDVDGSPTAIEGVKQAGEDSPLAGMTEYAFTDRHLVWLQQYWTSEADFHTLTMNYVLTGDK
QGMVNDLNAFFNPMKADVD
>Mature_419_residues
MEWYKKIGLLATTGLALFGLGACSNYGKSADGTVTIEYFNQKKEMTKTLEEITRDFEKENPKIKVKVVNVPNAGEVLKTR
VLAGDVPDVVNIYPQSIELQEWAKAGVFEDLSNKDYLKRVKNAYAEKYAVNEKVYNVPFTANAYGIYYNKDKFEELGLKV
PETWDEFEQLVKDIVAKGQTSFGIAGADAWTLNGYNQLAFATATGGGKEANQYLRYSQPNAIKLSDPIMKDDIKVMDILR
INGSKQKNWEGAGYTDVIGAFARGDVLMTPNGSWAITAINEQKPNFKIGTFMIPGKEKGQSLTVGAGDLAWSISATTKHP
KEANAFVEYMTRPEVMQKYYDVDGSPTAIEGVKQAGEDSPLAGMTEYAFTDRHLVWLQQYWTSEADFHTLTMNYVLTGDK
QGMVNDLNAFFNPMKADVD

Specific function: Involved in a binding protein-dependent transport system responsible for the uptake of melibiose, raffinose and isomaltotriose [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=341, Percent_Identity=21.7008797653959, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46665; Mature: 46665

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWYKKIGLLATTGLALFGLGACSNYGKSADGTVTIEYFNQKKEMTKTLEEITRDFEKEN
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCC
PKIKVKVVNVPNAGEVLKTRVLAGDVPDVVNIYPQSIELQEWAKAGVFEDLSNKDYLKRV
CEEEEEEEECCCCCHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHCCCHHHCCCHHHHHHH
KNAYAEKYAVNEKVYNVPFTANAYGIYYNKDKFEELGLKVPETWDEFEQLVKDIVAKGQT
HHHHHHHHHCCCEEEECCEECCEEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCC
SFGIAGADAWTLNGYNQLAFATATGGGKEANQYLRYSQPNAIKLSDPIMKDDIKVMDILR
CCCCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEE
INGSKQKNWEGAGYTDVIGAFARGDVLMTPNGSWAITAINEQKPNFKIGTFMIPGKEKGQ
ECCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCC
SLTVGAGDLAWSISATTKHPKEANAFVEYMTRPEVMQKYYDVDGSPTAIEGVKQAGEDSP
EEEEECCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHCCCCCC
LAGMTEYAFTDRHLVWLQQYWTSEADFHTLTMNYVLTGDKQGMVNDLNAFFNPMKADVD
CCCCHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEWYKKIGLLATTGLALFGLGACSNYGKSADGTVTIEYFNQKKEMTKTLEEITRDFEKEN
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCC
PKIKVKVVNVPNAGEVLKTRVLAGDVPDVVNIYPQSIELQEWAKAGVFEDLSNKDYLKRV
CEEEEEEEECCCCCHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHCCCHHHCCCHHHHHHH
KNAYAEKYAVNEKVYNVPFTANAYGIYYNKDKFEELGLKVPETWDEFEQLVKDIVAKGQT
HHHHHHHHHCCCEEEECCEECCEEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCC
SFGIAGADAWTLNGYNQLAFATATGGGKEANQYLRYSQPNAIKLSDPIMKDDIKVMDILR
CCCCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEE
INGSKQKNWEGAGYTDVIGAFARGDVLMTPNGSWAITAINEQKPNFKIGTFMIPGKEKGQ
ECCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCC
SLTVGAGDLAWSISATTKHPKEANAFVEYMTRPEVMQKYYDVDGSPTAIEGVKQAGEDSP
EEEEECCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHCCCCCC
LAGMTEYAFTDRHLVWLQQYWTSEADFHTLTMNYVLTGDKQGMVNDLNAFFNPMKADVD
CCCCHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1537846; 12397186 [H]