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The map label for this gene is pepF [H]

Identifier: 221232520

GI number: 221232520

Start: 1740006

End: 1741802

Strand: Reverse

Name: pepF [H]

Synonym: SPN23F_17930

Alternate gene names: 221232520

Gene position: 1741802-1740006 (Counterclockwise)

Preceding gene: 221232521

Following gene: 221232519

Centisome position: 78.41

GC content: 45.91

Gene sequence:

>1797_bases
ATGGAACAAAAACACCGTTCAGAATTTCCAGAGAAGGAACTCTGGGACTTAACAGCCCTATACCAAGACCGTGAGGATTT
CTTGCGTGCAATCGAGAAAGCTCGTGAAGACATCAACCAATTTAGCCGTGATTACAAGGGCAATCTTCACACTTTTGAGG
ATTTCGAGAAGGCCTTTGCGGAATTGGAACAGATCTACATTCAGATGAGCCATATTGGCAACTATGCTTTTATGCCTCAG
ACGACGGACTATAGCAATGACGAATTTGCCAATATTGCCCAAGCTGGGATGGAATTTGAAACAGATGCCAGCGTAGCCTT
GACCTTCTTTGACGATGCCTTGGTGGTAGCAGACGAGGAAGTCTTGGACCGTTTGGGTGAATTGCCTCACTTGACGGCAG
CTATTCGTCAGGCCAAAATCAAAAAAGCCCACTATCTAGGGGCTGATGTGGAGAAGGCCTTGACCAATCTCGGTGAAGTT
TTCTATAGTCCGCAGGACATTTATACTAAGATGCGAGCTGGGGATTTTGAAATGGCTGACTTTGAAGCCCATGGCAAGAC
CTATAAAAACAGCTTTGTCACCTATGAGAATTTCTACCAAAATCACGAGGATGCTGAGGTTCGTGAGAAATCCTTCCGTT
CCTTCTCAGAGGGACTTCGTAAGCACCAAAATACGGCTGCAGCAGCCTATCTGGCTCAGGTCAAGTCTGAAAAACTCTTG
GCTGATATGAAGGGATACGACTCTGTCTTTGATTATCTTCTAGCTGAACAAGAAGTGGACCGTGTCATGTTTGACCGCCA
GATTGACCTCATCATGAAGGACTTTGCACCAGTCGCTCAGAGATACCTCAAGCATGTTGCCAAGGTAAATGGTCTTGAAA
AGATGACCTTTGCAGATTGGAAATTGGACTTGGACAGCGCCCTGAATCCTGAAGTGACTATTGACGATGCCTATGATTTG
GTCATGAAGTCGGTAGAACCTTTGGGGCAAGAATATTGTCAGGAAGTTGCTCGTTACCAAGAAGAGCGCTGGGTGGACTT
TGCTGCTAACAGTGGCAAGGATTCCGGTGGTTATGCGGCGGACCCATATCGCGTACACCCTTATGTACTCATGAGCTGGA
CAGGCCGTTTGAGCGATGTCTATACCTTGATTCATGAAATCGGGCATTCTGGTCAATTTATCTTTTCAGACAATCATCAA
AGCTATTTCAACGCCCACATGTCGACCTATTATGTTGAAGCACCGTCAACCTTCAATGAATTGCTACTCAGTGATTACTT
AGAGAACCAGTCTAATGACCCACGTCAAAAACGCTTCGCTCTGGCTCATCGCTTGACAGACACCTACTTCCATAATTTCA
TCACCCACCTCTTGGAAGCCGCCTTCCAGCGTAAGGTGTATACATTGATTGAAGAAGGGGAGACCTTTGGAGCAAGCAAG
CTCAACAGCATTATGAAGGAAGTTTTGACAGATTTTTGGGGCGATGCCATTGAAATCGACGACGATGCAGCTTTGACTTG
GATGCGCCAAGCTCACTACTATATGGGCTTGTATAGTTACACTTACTCTGCTGGTCTTGTCATCTCGACAGCTGGTTACC
TTCATCTTAAAAACTCAGAAACTGGAGCTGAAGACTGGCTCAATCTCCTCAAATCAGGTGGTAGCAAGACACCACTTGAG
TCAGCCATGATTATCGGTGCTGATATTTCAACAGACAAACCACTCCGTGATACCATCCAATTCTTGTCTGACACAGTTGA
CCAGATTATCGCCTACAGTGCTGAGTTGGGGGAGTAA

Upstream 100 bases:

>100_bases
GCAGGCCTAGGTCCTCGTATTTTGCGAGCAGAAACAGCACCGCTTTACGCCTTATCAGCCCTTAGTGTTTTAGTAGAATT
AGAGAAATAAGAGGAAGAAA

Downstream 100 bases:

>100_bases
GGGGAATAGAAAAATTTTCTAGAATGATGTTTATGGGCTTGTTAAGCGTCATTCTATTTGTCTTAGTTGTAGCTATTTTC
AAAAATGTCGTTGAAGGTCG

Product: oligopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 598; Mature: 598

Protein sequence:

>598_residues
MEQKHRSEFPEKELWDLTALYQDREDFLRAIEKAREDINQFSRDYKGNLHTFEDFEKAFAELEQIYIQMSHIGNYAFMPQ
TTDYSNDEFANIAQAGMEFETDASVALTFFDDALVVADEEVLDRLGELPHLTAAIRQAKIKKAHYLGADVEKALTNLGEV
FYSPQDIYTKMRAGDFEMADFEAHGKTYKNSFVTYENFYQNHEDAEVREKSFRSFSEGLRKHQNTAAAAYLAQVKSEKLL
ADMKGYDSVFDYLLAEQEVDRVMFDRQIDLIMKDFAPVAQRYLKHVAKVNGLEKMTFADWKLDLDSALNPEVTIDDAYDL
VMKSVEPLGQEYCQEVARYQEERWVDFAANSGKDSGGYAADPYRVHPYVLMSWTGRLSDVYTLIHEIGHSGQFIFSDNHQ
SYFNAHMSTYYVEAPSTFNELLLSDYLENQSNDPRQKRFALAHRLTDTYFHNFITHLLEAAFQRKVYTLIEEGETFGASK
LNSIMKEVLTDFWGDAIEIDDDAALTWMRQAHYYMGLYSYTYSAGLVISTAGYLHLKNSETGAEDWLNLLKSGGSKTPLE
SAMIIGADISTDKPLRDTIQFLSDTVDQIIAYSAELGE

Sequences:

>Translated_598_residues
MEQKHRSEFPEKELWDLTALYQDREDFLRAIEKAREDINQFSRDYKGNLHTFEDFEKAFAELEQIYIQMSHIGNYAFMPQ
TTDYSNDEFANIAQAGMEFETDASVALTFFDDALVVADEEVLDRLGELPHLTAAIRQAKIKKAHYLGADVEKALTNLGEV
FYSPQDIYTKMRAGDFEMADFEAHGKTYKNSFVTYENFYQNHEDAEVREKSFRSFSEGLRKHQNTAAAAYLAQVKSEKLL
ADMKGYDSVFDYLLAEQEVDRVMFDRQIDLIMKDFAPVAQRYLKHVAKVNGLEKMTFADWKLDLDSALNPEVTIDDAYDL
VMKSVEPLGQEYCQEVARYQEERWVDFAANSGKDSGGYAADPYRVHPYVLMSWTGRLSDVYTLIHEIGHSGQFIFSDNHQ
SYFNAHMSTYYVEAPSTFNELLLSDYLENQSNDPRQKRFALAHRLTDTYFHNFITHLLEAAFQRKVYTLIEEGETFGASK
LNSIMKEVLTDFWGDAIEIDDDAALTWMRQAHYYMGLYSYTYSAGLVISTAGYLHLKNSETGAEDWLNLLKSGGSKTPLE
SAMIIGADISTDKPLRDTIQFLSDTVDQIIAYSAELGE
>Mature_598_residues
MEQKHRSEFPEKELWDLTALYQDREDFLRAIEKAREDINQFSRDYKGNLHTFEDFEKAFAELEQIYIQMSHIGNYAFMPQ
TTDYSNDEFANIAQAGMEFETDASVALTFFDDALVVADEEVLDRLGELPHLTAAIRQAKIKKAHYLGADVEKALTNLGEV
FYSPQDIYTKMRAGDFEMADFEAHGKTYKNSFVTYENFYQNHEDAEVREKSFRSFSEGLRKHQNTAAAAYLAQVKSEKLL
ADMKGYDSVFDYLLAEQEVDRVMFDRQIDLIMKDFAPVAQRYLKHVAKVNGLEKMTFADWKLDLDSALNPEVTIDDAYDL
VMKSVEPLGQEYCQEVARYQEERWVDFAANSGKDSGGYAADPYRVHPYVLMSWTGRLSDVYTLIHEIGHSGQFIFSDNHQ
SYFNAHMSTYYVEAPSTFNELLLSDYLENQSNDPRQKRFALAHRLTDTYFHNFITHLLEAAFQRKVYTLIEEGETFGASK
LNSIMKEVLTDFWGDAIEIDDDAALTWMRQAHYYMGLYSYTYSAGLVISTAGYLHLKNSETGAEDWLNLLKSGGSKTPLE
SAMIIGADISTDKPLRDTIQFLSDTVDQIIAYSAELGE

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 68630; Mature: 68630

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQKHRSEFPEKELWDLTALYQDREDFLRAIEKAREDINQFSRDYKGNLHTFEDFEKAFA
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ELEQIYIQMSHIGNYAFMPQTTDYSNDEFANIAQAGMEFETDASVALTFFDDALVVADEE
HHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEECHH
VLDRLGELPHLTAAIRQAKIKKAHYLGADVEKALTNLGEVFYSPQDIYTKMRAGDFEMAD
HHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
FEAHGKTYKNSFVTYENFYQNHEDAEVREKSFRSFSEGLRKHQNTAAAAYLAQVKSEKLL
HHHCCCHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADMKGYDSVFDYLLAEQEVDRVMFDRQIDLIMKDFAPVAQRYLKHVAKVNGLEKMTFADW
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCEECCC
KLDLDSALNPEVTIDDAYDLVMKSVEPLGQEYCQEVARYQEERWVDFAANSGKDSGGYAA
EEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DPYRVHPYVLMSWTGRLSDVYTLIHEIGHSGQFIFSDNHQSYFNAHMSTYYVEAPSTFNE
CCEEECCEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHEEEEECCCHHHH
LLLSDYLENQSNDPRQKRFALAHRLTDTYFHNFITHLLEAAFQRKVYTLIEEGETFGASK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LNSIMKEVLTDFWGDAIEIDDDAALTWMRQAHYYMGLYSYTYSAGLVISTAGYLHLKNSE
HHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEECCC
TGAEDWLNLLKSGGSKTPLESAMIIGADISTDKPLRDTIQFLSDTVDQIIAYSAELGE
CCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEQKHRSEFPEKELWDLTALYQDREDFLRAIEKAREDINQFSRDYKGNLHTFEDFEKAFA
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ELEQIYIQMSHIGNYAFMPQTTDYSNDEFANIAQAGMEFETDASVALTFFDDALVVADEE
HHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEECHH
VLDRLGELPHLTAAIRQAKIKKAHYLGADVEKALTNLGEVFYSPQDIYTKMRAGDFEMAD
HHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
FEAHGKTYKNSFVTYENFYQNHEDAEVREKSFRSFSEGLRKHQNTAAAAYLAQVKSEKLL
HHHCCCHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADMKGYDSVFDYLLAEQEVDRVMFDRQIDLIMKDFAPVAQRYLKHVAKVNGLEKMTFADW
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCEECCC
KLDLDSALNPEVTIDDAYDLVMKSVEPLGQEYCQEVARYQEERWVDFAANSGKDSGGYAA
EEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DPYRVHPYVLMSWTGRLSDVYTLIHEIGHSGQFIFSDNHQSYFNAHMSTYYVEAPSTFNE
CCEEECCEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHEEEEECCCHHHH
LLLSDYLENQSNDPRQKRFALAHRLTDTYFHNFITHLLEAAFQRKVYTLIEEGETFGASK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LNSIMKEVLTDFWGDAIEIDDDAALTWMRQAHYYMGLYSYTYSAGLVISTAGYLHLKNSE
HHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEECCC
TGAEDWLNLLKSGGSKTPLESAMIIGADISTDKPLRDTIQFLSDTVDQIIAYSAELGE
CCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]