Click here to switch to the map view.

The map label for this gene is epsJ [H]

Identifier: 221232504

GI number: 221232504

Start: 1712485

End: 1713369

Strand: Reverse

Name: epsJ [H]

Synonym: SPN23F_17760

Alternate gene names: 221232504

Gene position: 1713369-1712485 (Counterclockwise)

Preceding gene: 221232505

Following gene: 221232503

Centisome position: 77.13

GC content: 31.75

Gene sequence:

>885_bases
ATGAAAGATTTAATAAGTGTTATAGTACCAGTTTATAACGTAGAACCATTTATTTCTAGCTGCTTAGACAGTTTATCGAA
ACAGATTTATCAAAATTTTGAAGTTTTATTAGTAAATGATGGCTCTACAGATAATTCAGGAGCAATATGTCGAGAGTATG
CTGATCGTGATAGTCGTTTTCACTATTTCGAAAAAGAAAATGCTGGGGTAGCGGATGCACGTAATTTTGGAATCGAGAGA
TCTAAAGGAGATTATATTACTTTTGTAGACTCAGATGATTGGGTTACTGAAGAGTATTTATCAATTCTTATAGAAACTTT
GAAGGAGCAGCATTCTGAAATTGTTGTTTCAACTTATTCAACCTATAATGAGTCAGATGGCTTATTCTATATTCACGTAT
TTGACTCCGATTATTATGTGAAAAATTATAATTCAAAACTTCTAATGGAAGAACTTCCTTTATTAGAGAGGTATGATATG
AGCTTTTTAACTTCTTGGGGAATTCTATTTAAAAGGGAATTATTTCAAGAAGTTCAGTTTCCGTTTGGTCGGGTGTGTGA
GTATATAGGAACCAATTATAAATTATTTATGCAGGTTGAGAAAGTAACCTATATTAATAAAGTTTTGTATTGGTATAGGG
TTGGGAAAGAAGGACTTTCTAATTCTTATTCACCGAAGATGATGCGTGATGATTGTGATTTTAGGTTAGAACGAATTGCC
GTGCTAGCGCTAAAAGGATATGATGTCAGTAAATATTTAGACCAGATGAAGTTCTATTTGAAATATCGTCATGATATTGC
AATTCAACGAGAACTTAAGGAGAATGTGGAAACAAGACATTTAGAAATGTTAGACTATTTATTGAATGGTAATAAATATA
ACTGA

Upstream 100 bases:

>100_bases
ATAAACATACTGCAGAACATAATTTCGACCAAGATATTGAATTTATTGATGATGAAACCTATAACAGTCAGATTTTAGTT
GATTTATCAAAAAGAGAAGT

Downstream 100 bases:

>100_bases
AAATTAAGATAGAGAGACGATAAAATGTTACAAGATAAGAAATCTGTAGTATTTGCAGGTGATTACGCTTATATTCGACA
AATCGAAACGGCGATGAAGT

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKDLISVIVPVYNVEPFISSCLDSLSKQIYQNFEVLLVNDGSTDNSGAICREYADRDSRFHYFEKENAGVADARNFGIER
SKGDYITFVDSDDWVTEEYLSILIETLKEQHSEIVVSTYSTYNESDGLFYIHVFDSDYYVKNYNSKLLMEELPLLERYDM
SFLTSWGILFKRELFQEVQFPFGRVCEYIGTNYKLFMQVEKVTYINKVLYWYRVGKEGLSNSYSPKMMRDDCDFRLERIA
VLALKGYDVSKYLDQMKFYLKYRHDIAIQRELKENVETRHLEMLDYLLNGNKYN

Sequences:

>Translated_294_residues
MKDLISVIVPVYNVEPFISSCLDSLSKQIYQNFEVLLVNDGSTDNSGAICREYADRDSRFHYFEKENAGVADARNFGIER
SKGDYITFVDSDDWVTEEYLSILIETLKEQHSEIVVSTYSTYNESDGLFYIHVFDSDYYVKNYNSKLLMEELPLLERYDM
SFLTSWGILFKRELFQEVQFPFGRVCEYIGTNYKLFMQVEKVTYINKVLYWYRVGKEGLSNSYSPKMMRDDCDFRLERIA
VLALKGYDVSKYLDQMKFYLKYRHDIAIQRELKENVETRHLEMLDYLLNGNKYN
>Mature_294_residues
MKDLISVIVPVYNVEPFISSCLDSLSKQIYQNFEVLLVNDGSTDNSGAICREYADRDSRFHYFEKENAGVADARNFGIER
SKGDYITFVDSDDWVTEEYLSILIETLKEQHSEIVVSTYSTYNESDGLFYIHVFDSDYYVKNYNSKLLMEELPLLERYDM
SFLTSWGILFKRELFQEVQFPFGRVCEYIGTNYKLFMQVEKVTYINKVLYWYRVGKEGLSNSYSPKMMRDDCDFRLERIA
VLALKGYDVSKYLDQMKFYLKYRHDIAIQRELKENVETRHLEMLDYLLNGNKYN

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI57770468, Length=123, Percent_Identity=31.7073170731707, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1790044, Length=89, Percent_Identity=42.6966292134831, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 34857; Mature: 34857

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLISVIVPVYNVEPFISSCLDSLSKQIYQNFEVLLVNDGSTDNSGAICREYADRDSRF
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCE
HYFEKENAGVADARNFGIERSKGDYITFVDSDDWVTEEYLSILIETLKEQHSEIVVSTYS
EEEECCCCCCCHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCEEEEEEEC
TYNESDGLFYIHVFDSDYYVKNYNSKLLMEELPLLERYDMSFLTSWGILFKRELFQEVQF
CCCCCCCEEEEEEECCCEEEECCCCHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHCC
PFGRVCEYIGTNYKLFMQVEKVTYINKVLYWYRVGKEGLSNSYSPKMMRDDCDFRLERIA
CHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHCCHHHHHHHHE
VLALKGYDVSKYLDQMKFYLKYRHDIAIQRELKENVETRHLEMLDYLLNGNKYN
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKDLISVIVPVYNVEPFISSCLDSLSKQIYQNFEVLLVNDGSTDNSGAICREYADRDSRF
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCE
HYFEKENAGVADARNFGIERSKGDYITFVDSDDWVTEEYLSILIETLKEQHSEIVVSTYS
EEEECCCCCCCHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCEEEEEEEC
TYNESDGLFYIHVFDSDYYVKNYNSKLLMEELPLLERYDMSFLTSWGILFKRELFQEVQF
CCCCCCCEEEEEEECCCEEEECCCCHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHCC
PFGRVCEYIGTNYKLFMQVEKVTYINKVLYWYRVGKEGLSNSYSPKMMRDDCDFRLERIA
CHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHCCHHHHHHHHE
VLALKGYDVSKYLDQMKFYLKYRHDIAIQRELKENVETRHLEMLDYLLNGNKYN
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]