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The map label for this gene is peb1A [H]

Identifier: 221231432

GI number: 221231432

Start: 533721

End: 534485

Strand: Reverse

Name: peb1A [H]

Synonym: SPN23F_05490

Alternate gene names: 221231432

Gene position: 534485-533721 (Counterclockwise)

Preceding gene: 221231433

Following gene: 221231431

Centisome position: 24.06

GC content: 44.05

Gene sequence:

>765_bases
TTGATTAGCCTTTTCGGCCTTGCTGCTGCCAAACCAGTCCAGGCTGATACAAGTATCGCAGACATTCAAAAAAGAGGCGA
ACTGGTTGTCGGTGTCAAACAAGACGTTCCCAATTTTGGTTACAAAGATCCCAAGACCGGTACTTATTCTGGTATCGAAA
CCGACTTGGCCAAGATGGTAGCTGATGAACTCAAGGTCAAGATTCGCTATGTGCCGGTTACAGCACAAACCCGCGGCCCC
CTTCTAGACAATGAACAGGTCGATATGGATATCGCGACCTTTACCATCACGGACGAACGCAAAAAACTCTACAACTTTAC
CAGTCCCTACTACACAGACGCTTCTGGATTTTTGGTCAATAAATCTGCCAAAATCAAAAAGATTGAGGACCTAAACAGCA
AAACCATCGGAGTCGCCCAAGGCTCCATCACCCAATGCCTGATTACTGAACTGGGCAAAAAGAAAGGTCTAACCTTTAAA
TTTGTCGAACTTGGTTCCTACCCAGAATTGATTACTTCCCTTCACGCTCATCGTATCGATGCCTTTTCCGTTGACCGCTC
TATTCTGTCTGGCTACACTAGTAAACGCACAGAACTACTAGATGATAGTTTCAAGCCATCTGACTACGGTATTGTTACCA
AGAAATCAAATACAGAGCTCAACGACTATCTTGATAACTTGGTTACTAAATGGAGCAAGGATGGTAGTTTGCAGAAACTT
TATGACCGTTACAAGCTCAAACCATCTAGCCATACTGCAGATTAA

Upstream 100 bases:

>100_bases
ACCTCGTGCCCAACAATTCCTCAGCAAAATTATCAACCACGAAAGTGACAAAGTCAAATAAGGAGGCGCCTATGAAAAAA
AATTCTTTTTATCAGCATTA

Downstream 100 bases:

>100_bases
GGAGGACACCCCATGACAGATTTATCATCTTGGACAGCCTATTTTCAGGATTTTGGACAATTTTTCAATGGTTTCCTCTT
TACTCTTGCCCTAGCGATTG

Product: glutamine-binding protein precursor

Products: NA

Alternate protein names: CBF1; PEB1 [H]

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMVADELKVKIRYVPVTAQTRGP
LLDNEQVDMDIATFTITDERKKLYNFTSPYYTDASGFLVNKSAKIKKIEDLNSKTIGVAQGSITQCLITELGKKKGLTFK
FVELGSYPELITSLHAHRIDAFSVDRSILSGYTSKRTELLDDSFKPSDYGIVTKKSNTELNDYLDNLVTKWSKDGSLQKL
YDRYKLKPSSHTAD

Sequences:

>Translated_254_residues
MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMVADELKVKIRYVPVTAQTRGP
LLDNEQVDMDIATFTITDERKKLYNFTSPYYTDASGFLVNKSAKIKKIEDLNSKTIGVAQGSITQCLITELGKKKGLTFK
FVELGSYPELITSLHAHRIDAFSVDRSILSGYTSKRTELLDDSFKPSDYGIVTKKSNTELNDYLDNLVTKWSKDGSLQKL
YDRYKLKPSSHTAD
>Mature_254_residues
MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMVADELKVKIRYVPVTAQTRGP
LLDNEQVDMDIATFTITDERKKLYNFTSPYYTDASGFLVNKSAKIKKIEDLNSKTIGVAQGSITQCLITELGKKKGLTFK
FVELGSYPELITSLHAHRIDAFSVDRSILSGYTSKRTELLDDSFKPSDYGIVTKKSNTELNDYLDNLVTKWSKDGSLQKL
YDRYKLKPSSHTAD

Specific function: Common antigen and a major cell adherence molecule. Most probably involved, with PEB1C, in a binding-protein-dependent transport system for an amino acid. May be involved in binding to intestinal cells [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cell surface [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=231, Percent_Identity=28.1385281385281, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1786876, Length=243, Percent_Identity=21.8106995884774, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787088, Length=201, Percent_Identity=27.363184079602, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1787031, Length=204, Percent_Identity=28.921568627451, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787085, Length=201, Percent_Identity=25.8706467661692, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 28255; Mature: 28255

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV
CEEEECCCCCCCCCCCCHHHHHHHCCCEEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHH
ADELKVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNFTSPYYTDASGFLVN
HHHHEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEHHHHHHHCCCCCCEECCCCEEEE
KSAKIKKIEDLNSKTIGVAQGSITQCLITELGKKKGLTFKFVELGSYPELITSLHAHRID
CCCCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCH
AFSVDRSILSGYTSKRTELLDDSFKPSDYGIVTKKSNTELNDYLDNLVTKWSKDGSLQKL
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHH
YDRYKLKPSSHTAD
HHHHCCCCCCCCCC
>Mature Secondary Structure
MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV
CEEEECCCCCCCCCCCCHHHHHHHCCCEEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHH
ADELKVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNFTSPYYTDASGFLVN
HHHHEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEHHHHHHHCCCCCCEECCCCEEEE
KSAKIKKIEDLNSKTIGVAQGSITQCLITELGKKKGLTFKFVELGSYPELITSLHAHRID
CCCCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCH
AFSVDRSILSGYTSKRTELLDDSFKPSDYGIVTKKSNTELNDYLDNLVTKWSKDGSLQKL
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHH
YDRYKLKPSSHTAD
HHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10688204; 1885571 [H]